RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 NEDD8-MDP1E9PL57 170 aa11□□□□□ -0.65
CALD1-217ENST00000475772 TERTO14746 1132 aaKnown RBP11□□□□□ -0.65
CALD1-217ENST00000475772 PHACTR2O75167 634 aa11□□□□□ -0.65
CALD1-217ENST00000475772 YEATS4O95619 227 aa11□□□□□ -0.65
CALD1-217ENST00000475772 TYRP14679 529 aa11□□□□□ -0.65
CALD1-217ENST00000475772 MAOBP27338 520 aa11□□□□□ -0.65
CALD1-217ENST00000475772 HOXD12P35452 270 aa11□□□□□ -0.65
CALD1-217ENST00000475772 DPP6P42658 865 aa11□□□□□ -0.65
CALD1-217ENST00000475772 AFMP43652 599 aa11□□□□□ -0.65
CALD1-217ENST00000475772 SIM1P81133 766 aaPredicted RBP11□□□□□ -0.65
CALD1-217ENST00000475772 GFPT1Q06210 699 aaPredicted RBP11□□□□□ -0.65
CALD1-217ENST00000475772 BIRC3Q13489 604 aa11□□□□□ -0.65
CALD1-217ENST00000475772 ZACNQ401N2 412 aa11□□□□□ -0.65
CALD1-217ENST00000475772 GRAMD4Q6IC98 578 aa11□□□□□ -0.65
CALD1-217ENST00000475772 SLC36A4Q6YBV0 504 aa11□□□□□ -0.65
CALD1-217ENST00000475772 CLEC20AQ6ZU45 233 aa11□□□□□ -0.65
CALD1-217ENST00000475772 SV2AQ7L0J3 742 aa11□□□□□ -0.65
CALD1-217ENST00000475772 TRMT11Q7Z4G4 463 aaKnown RBP11□□□□□ -0.65
CALD1-217ENST00000475772 SCD5Q86SK9 330 aa11□□□□□ -0.65
CALD1-217ENST00000475772 SLC9A9Q8IVB4 645 aa11□□□□□ -0.65
CALD1-217ENST00000475772 CHCHD4Q8N4Q1 142 aa11□□□□□ -0.65
CALD1-217ENST00000475772 MINDY1Q8N5J2 469 aa11□□□□□ -0.65
CALD1-217ENST00000475772 TRIML1Q8N9V2 468 aa11□□□□□ -0.65
CALD1-217ENST00000475772 KIAA0895Q8NCT3 520 aa11□□□□□ -0.65
CALD1-217ENST00000475772 TMEM174Q8WUU8 243 aa11□□□□□ -0.65
CALD1-217ENST00000475772 MRGPRX1Q96LB2 322 aa11□□□□□ -0.65
CALD1-217ENST00000475772 GTPBP2Q9BX10 602 aaKnown RBP11□□□□□ -0.65
CALD1-217ENST00000475772 BBS2Q9BXC9 721 aa11□□□□□ -0.65
CALD1-217ENST00000475772 KCTD10Q9H3F6 313 aa11□□□□□ -0.65
CALD1-217ENST00000475772 KRT82Q9NSB4 513 aa11□□□□□ -0.65
CALD1-217ENST00000475772 DNAJC17Q9NVM6 304 aaKnown RBP11□□□□□ -0.65
CALD1-217ENST00000475772 DNAAF2Q9NVR5 837 aaKnown RBP11□□□□□ -0.65
CALD1-217ENST00000475772 PLK2Q9NYY3 685 aa11□□□□□ -0.65
CALD1-217ENST00000475772 PCDHA7Q9UN72 937 aa11□□□□□ -0.65
CALD1-217ENST00000475772 CYP8B1Q9UNU6 501 aa11□□□□□ -0.65
CALD1-217ENST00000475772 URB1O60287 2271 aaKnown RBP11□□□□□ -0.65
CALD1-217ENST00000475772 A0A1W2PQD8 194 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 SLC35F4A4IF30 521 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 SH3BP5O60239 455 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 OPHN1O60890 802 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 ASS1P00966 412 aaKnown RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 KLKB1P03952 638 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 ATP5C1P36542 298 aaKnown RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 ASPAP45381 313 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 ATP1A2P50993 1020 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 AP3M2P53677 418 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 RING1Q06587 406 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 COL9A2Q14055 689 aaPredicted RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 SGSM1Q2NKQ1 1148 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 PREPLQ4J6C6 727 aaPredicted RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 LRSAM1Q6UWE0 723 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 RAB44Q7Z6P3 723 aaPredicted RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 UNC93AQ86WB7 457 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 CHPFQ8IZ52 775 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 HSPA12BQ96MM6 686 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 XPO6Q96QU8 1125 aaKnown RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 HNRNPABQ99729 332 aaKnown RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 FBXO44Q9H4M3 255 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 APOBEC3GQ9HC16 384 aaKnown RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 TLR8Q9NR97 1041 aaKnown RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 FAM49BQ9NUQ9 324 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.99□□□□□ -0.65
CALD1-217ENST00000475772 CACNA2D2Q9NY47 1150 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 SERTAD1Q9UHV2 236 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 CLEC4EQ9ULY5 219 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 SCML2Q9UQR0 700 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 APC2O95996 2303 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 SMG1Q96Q15 3661 aaKnown RBP10.99□□□□□ -0.65
CALD1-217ENST00000475772 LOC400499M0QZD8 3231 aa10.99□□□□□ -0.65
CALD1-217ENST00000475772 A0A1W2PQH9 124 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 KCNJ18B7U540 433 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 CYP26A1O43174 497 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 ZNF217O75362 1048 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 STC2O76061 302 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 DKK1O94907 266 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 RARGP13631 454 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 ACO1P21399 889 aaKnown RBP10.98□□□□□ -0.65
CALD1-217ENST00000475772 ADORA2BP29275 332 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 DGKGP49619 791 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 KIF11P52732 1056 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 ENPP2Q13822 863 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 RESP18Q5W5W9 173 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 KLHDC10Q6PID8 442 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 HDDC3Q8N4P3 179 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 ZNF276Q8N554 614 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 RBBP8NLQ8NC74 664 aaPredicted RBP10.98□□□□□ -0.65
CALD1-217ENST00000475772 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
CALD1-217ENST00000475772 ZCCHC14Q8WYQ9 949 aaKnown RBP10.98□□□□□ -0.65
CALD1-217ENST00000475772 CYFIP2Q96F07 1278 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 ZNF396Q96N95 335 aaPredicted RBP10.98□□□□□ -0.65
CALD1-217ENST00000475772 MKRN2Q9H000 416 aaKnown RBP10.98□□□□□ -0.65
CALD1-217ENST00000475772 MAGEF1Q9HAY2 307 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 WSB2Q9NYS7 404 aaPredicted RBP10.98□□□□□ -0.65
CALD1-217ENST00000475772 WDR35Q9P2L0 1181 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 USP3Q9Y6I4 520 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 ATP8B3O60423 1300 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 TMEM131Q92545 1883 aa10.98□□□□□ -0.65
CALD1-217ENST00000475772 K7ELQ4 463 aaPredicted RBP10.97□□□□□ -0.65
CALD1-217ENST00000475772 GFRA2O00451 464 aa10.97□□□□□ -0.65
CALD1-217ENST00000475772 HLA-DRAP01903 254 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms