RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PIGRP01833 764 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 MAGEA3P43357 314 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 PEX6Q13608 980 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 TFDP2Q14188 446 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 PCLAFQ15004 111 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 ACAP1Q15027 740 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 N4BP2L1Q5TBK1 243 aaPredicted RBP18.27■□□□□ 0.52
CCM2-207ENST00000475551 C16orf46Q6P387 395 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 IYDQ6PHW0 289 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 PHTF2Q8N3S3 785 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 KCNN1Q92952 543 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 SERPINI1Q99574 410 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 POLR3FQ9H1D9 316 aaPredicted RBP18.27■□□□□ 0.52
CCM2-207ENST00000475551 USP18Q9UMW8 372 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
CCM2-207ENST00000475551 YWHAEP62258 255 aaKnown RBP18.27■□□□□ 0.51
CCM2-207ENST00000475551 ZNF394Q53GI3 561 aa18.27■□□□□ 0.51
CCM2-207ENST00000475551 ZBTB41Q5SVQ8 909 aa18.27■□□□□ 0.51
CCM2-207ENST00000475551 SCARA3Q6AZY7 606 aa18.27■□□□□ 0.51
CCM2-207ENST00000475551 ATG14Q6ZNE5 492 aa18.27■□□□□ 0.51
CCM2-207ENST00000475551 ERI1Q8IV48 349 aaKnown RBP18.27■□□□□ 0.51
CCM2-207ENST00000475551 FNDC8Q8TC99 324 aa18.27■□□□□ 0.51
CCM2-207ENST00000475551 SYTL5Q8TDW5 730 aaPredicted RBP18.27■□□□□ 0.51
CCM2-207ENST00000475551 SIGLEC10Q96LC7 697 aa18.27■□□□□ 0.51
CCM2-207ENST00000475551 EBNA1BP2Q99848 306 aaKnown RBP18.27■□□□□ 0.51
CCM2-207ENST00000475551 TMOD2Q9NZR1 351 aa18.27■□□□□ 0.51
CCM2-207ENST00000475551 ARID2Q68CP9 1835 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 H3BSA7 217 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 KCNN4O15554 427 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 CST3P01034 146 aaPredicted RBP18.26■□□□□ 0.51
CCM2-207ENST00000475551 HARS2P49590 506 aaKnown RBP18.26■□□□□ 0.51
CCM2-207ENST00000475551 PSMC1P62191 440 aaKnown RBP18.26■□□□□ 0.51
CCM2-207ENST00000475551 KLF10Q13118 480 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 MMRN1Q13201 1228 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 GK3PQ14409 553 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 PGM5Q15124 567 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
CCM2-207ENST00000475551 ISLR2Q6UXK2 745 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 CYS1Q717R9 158 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 SLC4A11Q8NBS3 891 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 DEPDC1BQ8WUY9 529 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 ZBTB45Q96K62 511 aaPredicted RBP18.26■□□□□ 0.51
CCM2-207ENST00000475551 SLC2A11Q9BYW1 496 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 LHX5Q9H2C1 402 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 TDRD3Q9H7E2 651 aaKnown RBP18.26■□□□□ 0.51
CCM2-207ENST00000475551 GABBR1Q9UBS5 961 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 PCDHA11Q9Y5I1 949 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 DCXO43602 365 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 DKC1O60832 514 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCM2-207ENST00000475551 ZMPSTE24O75844 475 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 LPIN1Q14693 890 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 SH3D19Q5HYK7 790 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 STRIP1Q5VSL9 837 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 DENND1BQ6P3S1 775 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 KLHL35Q6PF15 583 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 CROCCP3Q8IVE0 287 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 EMC1Q8N766 993 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 TJP2Q9UDY2 1190 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 DCDC2Q9UHG0 476 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 BCAP29Q9UHQ4 241 aa18.26■□□□□ 0.51
CCM2-207ENST00000475551 ITGBL1O95965 494 aaPredicted RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 APRTP07741 180 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 EIF2AK2P19525 551 aaKnown RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 AP3M2P53677 418 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 ABCE1P61221 599 aaKnown RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 FAXCQ5TGI0 409 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 VWA5B1Q5TIE3 1220 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 ZBTB8BQ8NAP8 495 aaPredicted RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 ATP6V0A1Q93050 837 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 ATP2A3Q93084 1043 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 TAAR1Q96RJ0 339 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 INO80BQ9C086 356 aaPredicted RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 NIF3L1Q9GZT8 377 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 MOCS1Q9NZB8 636 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 RSL24D1Q9UHA3 163 aaKnown RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 VPS28Q9UK41 221 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 SH3GLB1Q9Y371 365 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 KAT6AQ92794 2004 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 SPDYE16A6NNV3 312 aaPredicted RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 E9PBE3 544 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 ZBTB14O43829 449 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 COG7P83436 770 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 METTL21CQ5VZV1 264 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 SMYD5Q6GMV2 418 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 C10orf107Q8IVU9 208 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 BBS5Q8N3I7 341 aa18.25■□□□□ 0.51
CCM2-207ENST00000475551 PRPF31Q8WWY3 499 aaKnown RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 TRIM56Q9BRZ2 755 aaKnown RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 MAP3K20Q9NYL2 800 aaKnown RBP18.25■□□□□ 0.51
CCM2-207ENST00000475551 ZNF646O15015 1829 aaPredicted RBP18.24■□□□□ 0.51
CCM2-207ENST00000475551 CCDC130P13994 396 aa18.24■□□□□ 0.51
CCM2-207ENST00000475551 CDH6P55285 790 aa18.24■□□□□ 0.51
CCM2-207ENST00000475551 C6orf52Q5T4I8 152 aa18.24■□□□□ 0.51
CCM2-207ENST00000475551 PAOXQ6QHF9 649 aa18.24■□□□□ 0.51
CCM2-207ENST00000475551 C16orf89Q6UX73 402 aa18.24■□□□□ 0.51
CCM2-207ENST00000475551 XYLT1Q86Y38 959 aa18.24■□□□□ 0.51
CCM2-207ENST00000475551 HAUS8Q9BT25 410 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms