RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ARHGEF19Q8IW93 802 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 FNDC5Q8NAU1 212 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 ANKRD7Q92527 254 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 DIP2AQ14689 1571 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 PDZK1P1A8MUH7 402 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 FBXO21O94952 628 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 TPGS1Q6ZTW0 290 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 ZNF606Q8WXB4 792 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 MTG1Q9BT17 334 aaPredicted RBP11.23□□□□□ -0.61
VAPB-204ENST00000475243 ARHGAP20Q9P2F6 1191 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 SETBP1Q9Y6X0 1596 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 FAM86B2P0C5J1 330 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 MAPK1P28482 360 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 SSTR1P30872 391 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 FLT3P36888 993 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 CNTN2Q02246 1040 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 LUZP2Q86TE4 346 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 ITIH5Q86UX2 942 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 COMMD2Q86X83 199 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 KIAA0895Q8NCT3 520 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 GMCL1P1Q8NEA9 526 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 MYCBPAPQ8TBZ2 947 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 PIK3CDO00329 1044 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 SCTRP47872 440 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 CYB5D1Q6P9G0 228 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 C4orf19Q8IY42 314 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 GFM2Q969S9 779 aaKnown RBP11.23□□□□□ -0.61
VAPB-204ENST00000475243 ZNF518BQ9C0D4 1074 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 KLHL20Q9Y2M5 609 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 FAM47E-STBD1D6RA91 191 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 NUDT14O95848 222 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 FYNP06241 537 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SERPINF2P08697 491 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 PLD1Q13393 1074 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 BTG3Q14201 252 aaPredicted RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 HEATR4Q86WZ0 1026 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 DEFB107AQ8IZN7 70 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SPPL2AQ8TCT8 520 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 FAM120BQ96EK7 910 aaKnown RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 WDR41Q9HAD4 459 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 TBC1D13Q9NVG8 400 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 NAALADL1Q9UQQ1 740 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 TMED10P49755 219 aaKnown RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 YWHAZP63104 245 aaKnown RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 IL5RAQ01344 420 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 KDM7AQ6ZMT4 941 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 KCNMB4Q86W47 210 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 UXS1Q8NBZ7 420 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SEMA4AQ9H3S1 761 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 ATP6V1HQ9UI12 483 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CALCAP01258 141 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 GLI1P08151 1106 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 ENO2P09104 434 aaPredicted RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 RBP1P09455 135 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 BEX3Q00994 111 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SFSWAPQ12872 951 aaKnown RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 SLC39A12Q504Y0 691 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 DET1Q7L5Y6 550 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SLC26A11Q86WA9 606 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CCNJLQ8IV13 435 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 ACTRT1Q8TDG2 376 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 NAT9Q9BTE0 207 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 FBXO44Q9H4M3 255 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 PCDHB5Q9Y5E4 795 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 USP12O75317 370 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CSNK2BP67870 215 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CXCL9Q07325 125 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 LGI2Q8N0V4 545 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CAMKK1Q8N5S9 505 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 SLC2A14Q8TDB8 520 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 PAPOLBQ9NRJ5 636 aaKnown RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 TSC22D4Q9Y3Q8 395 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 GZMAP12544 262 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 YBX3P16989 372 aaKnown RBP eCLIP11.22□□□□□ -0.611e-7■□□□□ 9.9
VAPB-204ENST00000475243 ELK3P41970 407 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 TOMM20Q15388 145 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 FNDC3BQ53EP0 1204 aaKnown RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 PALB2Q86YC2 1186 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 NT5DC4Q86YG4 428 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SPATA20Q8TB22 786 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 C10orf88Q9H8K7 445 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 INPP4BO15327 924 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 N4BP2L1Q5TBK1 243 aaPredicted RBP11.22□□□□□ -0.61
VAPB-204ENST00000475243 GATAD2AQ86YP4 633 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 ABRAQ8N0Z2 381 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CNPY4Q8N129 248 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 DPP10Q8N608 796 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 RNF148Q8N7C7 305 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 ASZ1Q8WWH4 475 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CYP3A43Q9HB55 503 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 KCNQ5Q9NR82 932 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 SHOC2Q9UQ13 582 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 GRK4P32298 578 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 MFSD10Q14728 455 aa11.22□□□□□ -0.61
VAPB-204ENST00000475243 CCNG2Q16589 344 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms