RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 FTH1P19P0C7X4 201 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 ACADMP11310 421 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 MCCD1P59942 119 aaPredicted RBP26.05■■□□□ 1.76
TMEM54-205ENST00000475208 GOLGA7BQ2TAP0 167 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 EDRF1Q3B7T1 1238 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 TMEM215Q68D42 235 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 SERPINA13PQ6UXR4 307 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 BHLHA9Q7RTU4 235 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 NDRG1Q92597 394 aaKnown RBP26.05■■□□□ 1.76
TMEM54-205ENST00000475208 TATDN2Q93075 761 aa26.05■■□□□ 1.76
TMEM54-205ENST00000475208 METTL12A8MUP2 240 aa26.04■■□□□ 1.76
TMEM54-205ENST00000475208 TULP2O00295 520 aa26.04■■□□□ 1.76
TMEM54-205ENST00000475208 STX10O60499 249 aa26.04■■□□□ 1.76
TMEM54-205ENST00000475208 EPB41P11171 864 aaKnown RBP26.04■■□□□ 1.76
TMEM54-205ENST00000475208 ARID5AQ03989 594 aa26.04■■□□□ 1.76
TMEM54-205ENST00000475208 TRIP4Q15650 581 aaPredicted RBP26.04■■□□□ 1.76
TMEM54-205ENST00000475208 PM20D1Q6GTS8 502 aa26.04■■□□□ 1.76
TMEM54-205ENST00000475208 ADAMTS14Q8WXS8 1223 aa26.04■■□□□ 1.76
TMEM54-205ENST00000475208 NUP58Q9BVL2 599 aa26.04■■□□□ 1.76
TMEM54-205ENST00000475208 BCAT2O15382 392 aaPredicted RBP26.03■■□□□ 1.76
TMEM54-205ENST00000475208 HOXD9P28356 352 aaPredicted RBP26.03■■□□□ 1.76
TMEM54-205ENST00000475208 PDE4CQ08493 712 aa26.03■■□□□ 1.76
TMEM54-205ENST00000475208 FMNL3Q8IVF7 1028 aa26.03■■□□□ 1.76
TMEM54-205ENST00000475208 SMYD4Q8IYR2 804 aaPredicted RBP26.03■■□□□ 1.76
TMEM54-205ENST00000475208 PNPLA1Q8N8W4 532 aa26.03■■□□□ 1.76
TMEM54-205ENST00000475208 GOLPH3LQ9H4A5 285 aa26.03■■□□□ 1.76
TMEM54-205ENST00000475208 IL21RQ9HBE5 538 aa26.03■■□□□ 1.76
TMEM54-205ENST00000475208 OLA1Q9NTK5 396 aaKnown RBP26.03■■□□□ 1.76
TMEM54-205ENST00000475208 TSPAN16Q9UKR8 245 aa26.03■■□□□ 1.76
TMEM54-205ENST00000475208 XPO1O14980 1071 aaKnown RBP26.02■■□□□ 1.76
TMEM54-205ENST00000475208 TIMM44O43615 452 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 TSPAN3O60637 253 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 HLA-EP13747 358 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 HARS2P49590 506 aaKnown RBP26.02■■□□□ 1.76
TMEM54-205ENST00000475208 BCAT1P54687 386 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 RING1Q06587 406 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 MPPE1Q53F39 396 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 FAM124AQ86V42 546 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 OR2T3Q8NH03 318 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 GAREM1Q9H706 876 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 LRRC4Q9HBW1 653 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 EIF2B4Q9UI10 523 aaKnown RBP26.02■■□□□ 1.76
TMEM54-205ENST00000475208 PCOLCE2Q9UKZ9 415 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 ZDHHC9Q9Y397 364 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 FREM2Q5SZK8 3169 aa26.02■■□□□ 1.76
TMEM54-205ENST00000475208 CETN3O15182 167 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 CBFA2T3O75081 653 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 CER1O95813 267 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 HOXB3P14651 431 aaPredicted RBP26.01■■□□□ 1.75
TMEM54-205ENST00000475208 MATKP42679 507 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 BNC1Q01954 994 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 ADIGQ0VDE8 80 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 RNF139Q8WU17 664 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 HESX1Q9UBX0 185 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 SFMBT1Q9UHJ3 866 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 LHX6Q9UPM6 363 aa26.01■■□□□ 1.75
TMEM54-205ENST00000475208 FNDC3AQ9Y2H6 1198 aaKnown RBP26.01■■□□□ 1.75
TMEM54-205ENST00000475208 HBS1LQ9Y450 684 aaKnown RBP26.01■■□□□ 1.75
TMEM54-205ENST00000475208 DSPP15924 2871 aaKnown RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 A0A1W2PQ27 194 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 A0A1W2PQ64 194 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 TAF4O00268 1085 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 HLA-FP30511 346 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 BST2Q10589 180 aaKnown RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 CAMK2GQ13555 558 aaPredicted RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 CBWD6Q4V339 395 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 FNDC3BQ53EP0 1204 aaKnown RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 SGO2Q562F6 1265 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 DCAF17Q5H9S7 520 aaPredicted RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 CBWD3Q5JTY5 395 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 CBWD5Q5RIA9 395 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 TCERG1LQ5VWI1 586 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 IL27RAQ6UWB1 636 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 GLRX5Q86SX6 157 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 PROSER1Q86XN7 944 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 WFIKKN2Q8TEU8 576 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 SETD7Q8WTS6 366 aaKnown RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 CYB5D2Q8WUJ1 264 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 SNX19Q92543 992 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 EDEM1Q92611 657 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 IPO9Q96P70 1041 aaKnown RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 LHX5Q9H2C1 402 aa26■■□□□ 1.75
TMEM54-205ENST00000475208 APOBEC2Q9Y235 224 aaKnown RBP26■■□□□ 1.75
TMEM54-205ENST00000475208 ZNF202O95125 648 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 CAPNS1P04632 268 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 ZNF883P0CG24 379 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 CD19P15391 556 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 ZNF445P59923 1031 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 SCAPQ12770 1279 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 CUL2Q13617 745 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 BSPRYQ5W0U4 402 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 ZNF366Q8N895 744 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 C1orf216Q8TAB5 229 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 PCED1AQ9H1Q7 454 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 TM7SF3Q9NS93 570 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 ATRXP46100 2492 aa25.99■■□□□ 1.75
TMEM54-205ENST00000475208 MUC22E2RYF6 1773 aaPredicted RBP25.99■■□□□ 1.75
TMEM54-205ENST00000475208 HLA-BQ31612 363 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 LRSAM1Q6UWE0 723 aa25.98■■□□□ 1.75
TMEM54-205ENST00000475208 CHST9Q7L1S5 443 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms