RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 KDELR1P24390 212 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 L1CAMP32004 1257 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 CXCR5P32302 372 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 GTF2F1P35269 517 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 HCAR3P49019 387 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TERF1P54274 439 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TAS2R40P59535 323 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TPI1P60174 286 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 SLC25A11Q02978 314 aaKnown RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 SCAPQ12770 1279 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 LONRF2Q1L5Z9 754 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 SMTNL2Q2TAL5 461 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 RABGAP1LQ5R372 815 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TRNP1Q6NT89 227 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 RFX6Q8HWS3 928 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 CELF5Q8N6W0 485 aaKnown RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TTC16Q8NEE8 873 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 SHKBP1Q8TBC3 707 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 UBXN4Q92575 508 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 ZNF707Q96C28 371 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 ACSF2Q96CM8 615 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 RPGRIP1Q96KN7 1286 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 PSMB7Q99436 277 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 SNRNP25Q9BV90 132 aaKnown RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 APOL5Q9BWW9 433 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 KLF16Q9BXK1 252 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 RETREG1Q9H6L5 497 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 TDP1Q9NUW8 608 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 ARHGEF38Q9NXL2 777 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 OR12D3Q9UGF7 316 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 FEZ2Q9UHY8 353 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-206ENST00000474564 CD207Q9UJ71 328 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 ARHGAP26Q9UNA1 814 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 CPQQ9Y646 472 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 MYO16Q9Y6X6 1858 aa10.72□□□□□ -0.69
COL12A1-206ENST00000474564 E2F8A0AVK6 867 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 FGF10O15520 208 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 DDX3YO15523 660 aaKnown RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 LINC01565O15544 149 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 ACSL4O60488 711 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 SRGAP2O75044 1071 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 PAGE1O75459 146 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 PAPLNO95428 1278 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 IRF1P10914 325 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 GJA1P17302 382 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 TFE3P19532 575 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 WEE1P30291 646 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 GBP2P32456 591 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 SERPINB6P35237 376 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 PEX5P50542 639 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 DPYSL2Q16555 572 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 TTC39BQ5VTQ0 682 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 RWDD4Q6NW29 188 aaKnown RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 SPOCD1Q6ZMY3 1216 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 GET4Q7L5D6 327 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 BNIPLQ7Z465 357 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 TMEM150AQ86TG1 271 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 CHSY1Q86X52 802 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 DENND1CQ8IV53 801 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 YAF2Q8IY57 180 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 DEFB123Q8N688 67 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 CCDC185Q8N715 623 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 KIAA1958Q8N8K9 716 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 PATJQ8NI35 1801 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 ACTRT1Q8TDG2 376 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 KRT35Q92764 455 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 SLC39A13Q96H72 371 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 LRCH3Q96II8 777 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 FCRL2Q96LA5 508 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 CYP2S1Q96SQ9 504 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 ZNF670Q9BS34 389 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 SLC46A2Q9BY10 475 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 FRMD8P1Q9BZ68 369 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-206ENST00000474564 OSBPL8Q9BZF1 889 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 RNF38Q9H0F5 515 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 CFAP97Q9P2B7 532 aa10.71□□□□□ -0.69
COL12A1-206ENST00000474564 KRIT1O00522 736 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 APOL1O14791 398 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 STC2O76061 302 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 OLFM2O95897 454 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 FGGP02679 453 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 PYGMP11217 842 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 IL1R2P27930 398 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 EPHB2P29323 1055 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 CORO1AP31146 461 aaKnown RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 PTPN7P35236 360 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 PGFP49763 221 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 MLLT6P55198 1093 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 PITX1P78337 314 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 NTHL1P78549 312 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 RBM10P98175 930 aaKnown RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 LMNB2Q03252 620 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 CTC1Q2NKJ3 1217 aa10.7□□□□□ -0.7
COL12A1-206ENST00000474564 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
COL12A1-206ENST00000474564 HABP4Q5JVS0 413 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms