RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 TAF5LO75529 589 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 PDE8BO95263 885 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 SGPL1O95470 568 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 TBC1D3HP0C7X1 549 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 CST5P28325 142 aaPredicted RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 GALNSP34059 522 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 GRK5P34947 590 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 THBS4P35443 961 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 RBM6P78332 1123 aaKnown RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 COL10A1Q03692 680 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 SF3A3Q12874 501 aaKnown RBP eCLIP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 BIRC3Q13489 604 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 RAPGEF1Q13905 1077 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 DHX8Q14562 1220 aaKnown RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 HSP90AB4PQ58FF6 505 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 TBC1D3GQ6DHY5 549 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 TBC1D3CQ6IPX1 549 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 GRHL2Q6ISB3 625 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 ERAP2Q6P179 960 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 SYCE2Q6PIF2 218 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 ZNF813Q6ZN06 617 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 PIK3AP1Q6ZUJ8 805 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 ZNF354CQ86Y25 554 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 SMAP1Q8IYB5 467 aaPredicted RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 TBC1D3Q8IZP1 549 aaPredicted RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 CPXCR1Q8N123 301 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 NKAPQ8N5F7 415 aaKnown RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 OTUD7AQ8TE49 926 aaPredicted RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 STYXQ8WUJ0 223 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 PPM1EQ8WY54 764 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 KAT2BQ92831 832 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 CUL5Q93034 780 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 PIGSQ96S52 555 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 NUAK2Q9H093 628 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 PRDM8Q9NQV8 689 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 VPS45Q9NRW7 570 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 KIF17Q9P2E2 1029 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 SUFUQ9UMX1 484 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 RIPOR2Q9Y4F9 1068 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 SPATA31A5Q5VU36 1347 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 SPATA31A7Q8IWB4 1347 aa3.87□□□□□ -1.79
CLCC1-208ENST00000473062 ZNF335Q9H4Z2 1342 aaPredicted RBP3.87□□□□□ -1.79
CLCC1-208ENST00000473062 CCDC187A0A096LP49 1063 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 DSCR3O14972 297 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 DHHO43323 396 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 CA12O43570 354 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 RPP40O75818 363 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 CER1O95813 267 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 TFRCP02786 760 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 TUBB4AP04350 444 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 DHRS4L1P0CG22 281 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 SERPINA4P29622 427 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 HALP42357 657 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 AARSP49588 968 aaKnown RBP eCLIP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 CLK3P49761 638 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 OAZ1P54368 228 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 SLC12A2P55011 1212 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 RAE1P78406 368 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 GOLGA8FQ08AF8 430 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 GALNT1Q10472 559 aaPredicted RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 FOXF2Q12947 444 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 PPFIA1Q13136 1202 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 EFR3AQ14156 821 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 GRM4Q14833 912 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 GPR162Q16538 588 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 AAK1Q2M2I8 961 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 ZNF362Q5T0B9 420 aaPredicted RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 ANKRD40Q6AI12 368 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 DGAT2L7PQ6IED9 249 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 MSANTD2Q6P1R3 559 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 RANBP10Q6VN20 620 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 FAM47BQ8NA70 645 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 BCAS4Q8TDM0 211 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 NOC3LQ8WTT2 800 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 SLC22A17Q8WUG5 538 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 ASB12Q8WXK4 309 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 C3orf49Q96BT1 292 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 REPS1Q96D71 796 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 ZSCAN31Q96LW9 406 aaPredicted RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 TRAPPC9Q96Q05 1148 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 FAM167BQ9BTA0 163 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 DDX23Q9BUQ8 820 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 PABPC3Q9H361 631 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 SFXN1Q9H9B4 322 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 PPCSQ9HAB8 311 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 PRDM16Q9HAZ2 1276 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 PTPRHQ9HD43 1115 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 FLRT1Q9NZU1 646 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 PTGFRNQ9P2B2 879 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 IPO11Q9UI26 975 aaKnown RBP3.86□□□□□ -1.79
CLCC1-208ENST00000473062 CNTN6Q9UQ52 1028 aa3.86□□□□□ -1.79
CLCC1-208ENST00000473062 FER1L4A9Z1Z3 1794 aa3.85□□□□□ -1.79
CLCC1-208ENST00000473062 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.85□□□□□ -1.79
CLCC1-208ENST00000473062 PRRT4C9JH25 899 aa3.85□□□□□ -1.79
CLCC1-208ENST00000473062 FYB1O15117 783 aa3.85□□□□□ -1.79
CLCC1-208ENST00000473062 CCNT1O60563 726 aaKnown RBP3.85□□□□□ -1.79
CLCC1-208ENST00000473062 NBNO60934 754 aa3.85□□□□□ -1.79
CLCC1-208ENST00000473062 PPP6R2O75170 966 aa3.85□□□□□ -1.79
CLCC1-208ENST00000473062 TNFRSF6BO95407 300 aa3.85□□□□□ -1.79
CLCC1-208ENST00000473062 ENO1P06733 434 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms