RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 GABRB2P47870 512 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 ZNF445P59923 1031 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 PITX1P78337 314 aaPredicted RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 CDK17Q00537 523 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 CDR2Q01850 454 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 SRSF5Q13243 272 aaKnown RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 EIF4EBP2Q13542 120 aaPredicted RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 CRY1Q16526 586 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 ZSCAN23Q3MJ62 389 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 FAM133BQ5BKY9 247 aaKnown RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 EOGTQ5NDL2 527 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 PIK3R6Q5UE93 754 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 OLFML1Q6UWY5 402 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 LUZP1Q86V48 1076 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 ZDHHC17Q8IUH5 632 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 ZNF513Q8N8E2 541 aaPredicted RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 ZNF397Q8NF99 534 aaPredicted RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 SLC20A1Q8WUM9 679 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 CPA5Q8WXQ8 436 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 C18orf8Q96DM3 657 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 NAP1L5Q96NT1 182 aaPredicted RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 EPC1Q9H2F5 836 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 NOCTQ9UK39 431 aaKnown RBP9.52□□□□□ -0.89
SYN3-211ENST00000472027 HCN2Q9UL51 889 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 CLEC4EQ9ULY5 219 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 SLC27A6Q9Y2P4 619 aa9.52□□□□□ -0.89
SYN3-211ENST00000472027 F5P12259 2224 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 A0A1B0GTH6 734 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 AXIN1O15169 862 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 ADAM23O75077 832 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 APBB3O95704 486 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 LSM8O95777 96 aaKnown RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 SERPINC1P01008 464 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 CYP1A1P04798 512 aaPredicted RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 HNRNPLP14866 589 aaKnown RBP eCLIP9.51□□□□□ -0.89
SYN3-211ENST00000472027 HOXD9P28356 352 aaPredicted RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 SLC6A4P31645 630 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 GBP1P32455 592 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 NOS2P35228 1153 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 SGSHP51688 502 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 DGKEP52429 567 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 RNASE9P60153 205 aaKnown RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 NOMO3P69849 1222 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 FMO1Q01740 532 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 ARID5AQ03989 594 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 SIM2Q14190 667 aaPredicted RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 NR1I3Q14994 352 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 GEN1Q17RS7 908 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 C2CD6Q53TS8 623 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 ZC3H12AQ5D1E8 599 aaKnown RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 NAA35Q5VZE5 725 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 EGFLAMQ63HQ2 1017 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 NADSYN1Q6IA69 706 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 RFWD3Q6PCD5 774 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 SLC26A9Q7LBE3 791 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 CACNA2D4Q7Z3S7 1137 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 TRMT11Q7Z4G4 463 aaKnown RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 XYLT1Q86Y38 959 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 DDX50Q9BQ39 737 aaKnown RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 SLC2A11Q9BYW1 496 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 IRX2Q9BZI1 471 aaPredicted RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 POLMQ9NP87 494 aaPredicted RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.51□□□□□ -0.89
SYN3-211ENST00000472027 EBF1Q9UH73 591 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 XPO7Q9UIA9 1087 aaKnown RBP9.51□□□□□ -0.89
SYN3-211ENST00000472027 CACNA1IQ9P0X4 2223 aa9.51□□□□□ -0.89
SYN3-211ENST00000472027 SYNJ2BP-COX16A0A087WUM0 186 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 KCNU1A8MYU2 1149 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 M0QYT0 321 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 TBL1XO60907 577 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 DAB1O75553 588 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 CAVIN2O95810 425 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 MOCS2O96007 188 aaPredicted RBP9.5□□□□□ -0.89
SYN3-211ENST00000472027 APOEP02649 317 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 UNGP13051 313 aaPredicted RBP9.5□□□□□ -0.89
SYN3-211ENST00000472027 NTSR1P30989 418 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 CCR1P32246 355 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 MATKP42679 507 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 WASP42768 502 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 TPM4P67936 248 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 LPAL2Q16609 132 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 MS4A13Q5J8X5 152 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 MPP7Q5T2T1 576 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 FAM102AQ5T9C2 384 aaPredicted RBP9.5□□□□□ -0.89
SYN3-211ENST00000472027 SDE2Q6IQ49 451 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 PRR23BQ6ZRT6 265 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 CHPFQ8IZ52 775 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 ATP6V0D2Q8N8Y2 350 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 MSANTD4Q8NCY6 345 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 SLC30A5Q8TAD4 765 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 GAB3Q8WWW8 586 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 RNF34Q969K3 372 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 MYEOVQ96EZ4 313 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 BTN2A3PQ96KV6 586 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 PCDHB18PQ96TA0 734 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 ACOX2Q99424 681 aa9.5□□□□□ -0.89
SYN3-211ENST00000472027 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
SYN3-211ENST00000472027 FAM204AQ9H8W3 233 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms