RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF132P52740 706 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 GCNT1Q02742 428 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 KCNH2Q12809 1159 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 PAK1Q13153 545 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 ENPP2Q13822 863 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 EIF4HQ15056 248 aaKnown RBP23.52■■□□□ 1.36
C9orf3-213ENST00000471978 E2F5Q15329 346 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 DUOXA1Q1HG43 343 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 SH3PXD2AQ5TCZ1 1133 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 SLC41A1Q8IVJ1 513 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 ARHGEF19Q8IW93 802 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 TRIM59Q8IWR1 403 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 CEP76Q8TAP6 659 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 IRGQQ8WZA9 623 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 CIPCQ9C0C6 399 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 PRDM16Q9HAZ2 1276 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 GIPC1O14908 333 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 SYNCRIPO60506 623 aaKnown RBP23.51■■□□□ 1.35
C9orf3-213ENST00000471978 NDUFS2O75306 463 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 HOXD9P28356 352 aaPredicted RBP23.51■■□□□ 1.35
C9orf3-213ENST00000471978 ZNF445P59923 1031 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 ZNF234Q14588 700 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 ADGRF1Q5T601 910 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 TRIML1Q8N9V2 468 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 SRRTQ9BXP5 876 aaKnown RBP23.51■■□□□ 1.35
C9orf3-213ENST00000471978 STOML2Q9UJZ1 356 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 SLC6A14Q9UN76 642 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.51■■□□□ 1.35
C9orf3-213ENST00000471978 KMT2BQ9UMN6 2715 aaPredicted RBP23.51■■□□□ 1.35
C9orf3-213ENST00000471978 CEP192Q8TEP8 1941 aa23.51■■□□□ 1.35
C9orf3-213ENST00000471978 TIMM44O43615 452 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 LATS1O95835 1130 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 AFPP02771 609 aaKnown RBP23.5■■□□□ 1.35
C9orf3-213ENST00000471978 MARSP56192 900 aaKnown RBP23.5■■□□□ 1.35
C9orf3-213ENST00000471978 ARID5AQ03989 594 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 TMEM215Q68D42 235 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 MSANTD2Q6P1R3 559 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 RABEPKQ7Z6M1 372 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 METTL3Q86U44 580 aaKnown RBP23.5■■□□□ 1.35
C9orf3-213ENST00000471978 CLEC4CQ8WTT0 213 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 SORCS1Q8WY21 1168 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 GOLGA1Q92805 767 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 TMA16Q96EY4 203 aaKnown RBP23.5■■□□□ 1.35
C9orf3-213ENST00000471978 HSFY1Q96LI6 401 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 HSPA12BQ96MM6 686 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 MKRN2Q9H000 416 aaKnown RBP23.5■■□□□ 1.35
C9orf3-213ENST00000471978 FSCN3Q9NQT6 498 aa23.5■■□□□ 1.35
C9orf3-213ENST00000471978 LTFP02788 710 aa23.49■■□□□ 1.35
C9orf3-213ENST00000471978 SERPINF2P08697 491 aa23.49■■□□□ 1.35
C9orf3-213ENST00000471978 CSRP1P21291 193 aaKnown RBP23.49■■□□□ 1.35
C9orf3-213ENST00000471978 ATXN3P54252 364 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-213ENST00000471978 GFPT1Q06210 699 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-213ENST00000471978 ZNF419Q96HQ0 510 aaPredicted RBP23.49■■□□□ 1.35
C9orf3-213ENST00000471978 KREMEN1Q96MU8 473 aa23.49■■□□□ 1.35
C9orf3-213ENST00000471978 MIS12Q9H081 205 aa23.49■■□□□ 1.35
C9orf3-213ENST00000471978 INTS2Q9H0H0 1204 aaKnown RBP23.49■■□□□ 1.35
C9orf3-213ENST00000471978 MAP1BP46821 2468 aaKnown RBP23.49■■□□□ 1.35
C9orf3-213ENST00000471978 PI4KAP42356 2102 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 FBXO21O94952 628 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 CEACAM1P13688 526 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 PRKCHP24723 683 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 CD6P30203 668 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 SHC2P98077 582 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 SERPINA13PQ6UXR4 307 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 TMPRSS6Q8IU80 811 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 UNC45BQ8IWX7 931 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 RGL4Q8IZJ4 473 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 GTPBP2Q9BX10 602 aaKnown RBP23.48■■□□□ 1.35
C9orf3-213ENST00000471978 CAPN10Q9HC96 672 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 ITM2CQ9NQX7 267 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 USP36Q9P275 1121 aaKnown RBP23.48■■□□□ 1.35
C9orf3-213ENST00000471978 CACNA1BQ00975 2339 aa23.48■■□□□ 1.35
C9orf3-213ENST00000471978 FRYQ5TBA9 3013 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 FGFR1OPO95684 399 aaKnown RBP23.47■■□□□ 1.35
C9orf3-213ENST00000471978 EPHX1P07099 455 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 NCAM1P13591 858 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 KRT5P13647 590 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 HLA-FP30511 346 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 SLC11A2P49281 568 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 ZNF252P-AS1Q0IIN9 211 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 SYCP2LQ5T4T6 812 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 NUGGCQ68CJ6 796 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 WFIKKN2Q8TEU8 576 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 FOXJ1Q92949 421 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 SIPA1Q96FS4 1042 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 TOE1Q96GM8 510 aaKnown RBP23.47■■□□□ 1.35
C9orf3-213ENST00000471978 ST7Q9NRC1 585 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 CNTN6Q9UQ52 1028 aa23.47■■□□□ 1.35
C9orf3-213ENST00000471978 IGLV3-27P01718 113 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 SGSHP51688 502 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 TBX4P57082 545 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 RFWD3Q6PCD5 774 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 CHST9Q7L1S5 443 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 SCUBE3Q8IX30 993 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 DEFB124Q8NES8 71 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 PRCCQ92733 491 aaPredicted RBP23.46■■□□□ 1.35
C9orf3-213ENST00000471978 UBE2TQ9NPD8 197 aaPredicted RBP23.46■■□□□ 1.35
C9orf3-213ENST00000471978 ABCB8Q9NUT2 735 aa23.46■■□□□ 1.35
C9orf3-213ENST00000471978 WSB2Q9NYS7 404 aaPredicted RBP23.46■■□□□ 1.35
C9orf3-213ENST00000471978 PLA2G4CQ9UP65 541 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms