RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
APLF-204ENST00000471727 SLCO1B3Q9NPD5 702 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ARHGEF4Q9NR80 690 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 MOCS1Q9NZB8 636 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 IGSF9Q9P2J2 1179 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 CDH9Q9ULB4 789 aa10.98□□□□□ -0.65
APLF-204ENST00000471727 ARHGEF37A1IGU5 675 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 AP3B1O00203 1094 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 IGF2BP3O00425 579 aaKnown RBP eCLIP10.97□□□□□ -0.65
APLF-204ENST00000471727 TRAFD1O14545 582 aaPredicted RBP10.97□□□□□ -0.65
APLF-204ENST00000471727 PTGESO14684 152 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 BIRC5O15392 142 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 AVILO75366 819 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 WFS1O76024 890 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 IGHA2P01877 340 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 THP07101 528 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 EZRP15311 586 aaKnown RBP10.97□□□□□ -0.65
APLF-204ENST00000471727 GOT1P17174 413 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 TFE3P19532 575 aaPredicted RBP10.97□□□□□ -0.65
APLF-204ENST00000471727 PCSK1P29120 753 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 TKTP29401 623 aaKnown RBP10.97□□□□□ -0.65
APLF-204ENST00000471727 HIC1Q14526 733 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 TAF1CQ15572 869 aaPredicted RBP10.97□□□□□ -0.65
APLF-204ENST00000471727 CLEC20AQ6ZU45 233 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 SCML4Q8N228 414 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 ERP27Q96DN0 273 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 STAMBPL1Q96FJ0 436 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 SERAC1Q96JX3 654 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 LPIN3Q9BQK8 851 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 MYLK2Q9H1R3 596 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 LRMDAQ9H2I8 198 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 NOD2Q9HC29 1040 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 FLRT1Q9NZU1 646 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 GJD2Q9UKL4 321 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 CHKBQ9Y259 395 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 PLLPQ9Y342 182 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 MAD1L1Q9Y6D9 718 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 SCN1AP35498 2009 aa10.97□□□□□ -0.65
APLF-204ENST00000471727 ERI2A8K979 691 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 I3L4J1 428 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 M0QYT0 321 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 EEF2KO00418 725 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 CAPN9O14815 690 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 GPR182O15218 404 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 DNAJC6O75061 913 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 MX2P20592 715 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 CCND1P24385 295 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 DNAJB2P25686 324 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 CRHR1P34998 444 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 ADRA1BP35368 520 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 SERPINB4P48594 390 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 RAB27AP51159 221 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 TKTL1P51854 596 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 GTF2A1P52655 376 aaPredicted RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 ARFIP2P53365 341 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 ATXN1P54253 815 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 DAOAP59103 153 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 FRG1Q14331 258 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 NBPF20Q3BBV1 942 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 RAB41Q5JT25 222 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 WLSQ5T9L3 541 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 FAXCQ5TGI0 409 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 WSCD1Q658N2 575 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 C17orf99Q6UX52 265 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 PAQR9Q6ZVX9 377 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 ZNF534Q76KX8 674 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 MARK2Q7KZI7 788 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 NLRP9Q7RTR0 991 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 MRPL10Q7Z7H8 261 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 PRPF39Q86UA1 669 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 FAM131BQ86XD5 332 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 ARRDC4Q8NCT1 418 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 FAM111AQ96PZ2 611 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 SRPK1Q96SB4 655 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 VAT1Q99536 393 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 SYT15Q9BQS2 421 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 SPC25Q9HBM1 224 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 FAM105AQ9NUU6 356 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 DDX43Q9NXZ2 648 aaKnown RBP10.96□□□□□ -0.65
APLF-204ENST00000471727 SLC17A7Q9P2U7 560 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 BAIAP2L1Q9UHR4 511 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 LNPEPQ9UIQ6 1025 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 ZFP69BQ9UJL9 534 aa10.96□□□□□ -0.65
APLF-204ENST00000471727 GOLGA8RI6L899 631 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 PSMD3O43242 534 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 HCRTO43612 131 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 RFPL1O75677 317 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 PGAM1P18669 254 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 NKX3-2P78367 333 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 IFRD2Q12894 506 aaPredicted RBP10.95□□□□□ -0.66
APLF-204ENST00000471727 DPYSQ14117 519 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 PREPLQ4J6C6 727 aaPredicted RBP10.95□□□□□ -0.66
APLF-204ENST00000471727 MDH1BQ5I0G3 518 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 FAM91A1Q658Y4 838 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 DSTYKQ6XUX3 929 aa10.95□□□□□ -0.66
APLF-204ENST00000471727 KYAT3Q6YP21 454 aaKnown RBP10.95□□□□□ -0.66
APLF-204ENST00000471727 RFX8Q6ZV50 586 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms