RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 POLGP54098 1239 aaPredicted RBP6.44□□□□□ -1.38
CCDC39-202ENST00000471307 YPEL5P62699 121 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 RAE1P78406 368 aaKnown RBP6.44□□□□□ -1.38
CCDC39-202ENST00000471307 CNGA3Q16281 694 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 SLC5A9Q2M3M2 681 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 COBLL1Q53SF7 1204 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 KLHDC7AQ5VTJ3 777 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 TECPR1Q7Z6L1 1165 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 PIP4P1Q86T03 277 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 CCDC28AQ8IWP9 274 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 VCPIP1Q96JH7 1222 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 ZFYVE19Q96K21 471 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 NUDT22Q9BRQ3 303 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 TRMOQ9BU70 441 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 PCGF6Q9BYE7 350 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 ABHD10Q9NUJ1 306 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 TMEM184CQ9NVA4 438 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 CHPF2Q9P2E5 772 aa6.44□□□□□ -1.38
CCDC39-202ENST00000471307 NCOA2Q15596 1464 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 APOL1O14791 398 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 PLAUP00749 431 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 STIM1Q13586 685 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 ATP1A4Q13733 1029 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.43□□□□□ -1.38
CCDC39-202ENST00000471307 FAM90A2PQ658T7 463 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 NRACQ8N912 160 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 FCRL5Q96RD9 977 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 WDR26Q9H7D7 661 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 AS3MTQ9HBK9 375 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 TMEM8AQ9HCN3 771 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 CCNB3Q8WWL7 1395 aa6.43□□□□□ -1.38
CCDC39-202ENST00000471307 WDR7Q9Y4E6 1490 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 RRHO14718 337 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 EGR1P18146 543 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 DRD1P21728 446 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 IGHMBP2P38935 993 aaKnown RBP6.42□□□□□ -1.38
CCDC39-202ENST00000471307 SLC12A2P55011 1212 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 FOXG1P55316 489 aaPredicted RBP6.42□□□□□ -1.38
CCDC39-202ENST00000471307 DPP9Q86TI2 863 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 ARFGAP1Q8N6T3 406 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 BRI3BPQ8WY22 251 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 PMM1Q92871 262 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 PRR11Q96HE9 360 aaPredicted RBP6.42□□□□□ -1.38
CCDC39-202ENST00000471307 SENP7Q9BQF6 1050 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 TM2D2Q9BX73 214 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 MYOM3Q5VTT5 1437 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 MIA2Q96PC5 1412 aa6.42□□□□□ -1.38
CCDC39-202ENST00000471307 KIF14Q15058 1648 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 ZSCAN9O15535 394 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 SLC3A2P08195 630 aaKnown RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 YY1P25490 414 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 GABRB3P28472 473 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 HOXD12P35452 270 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 SEMA3BQ13214 749 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 TRIM71Q2Q1W2 868 aaKnown RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 ARL13BQ3SXY8 428 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 ZNF260Q3ZCT1 412 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 TMEM196Q5HYL7 178 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 EARS2Q5JPH6 523 aaKnown RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 RBM44Q6ZP01 1051 aaKnown RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 IRF2BP2Q7Z5L9 587 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 UEVLDQ8IX04 471 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 GDF15Q99988 308 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 PCDHAC1Q9H158 963 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 AGO4Q9HCK5 861 aaKnown RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 GEMIN8Q9NWZ8 242 aaKnown RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 HEY2Q9UBP5 337 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 CFDP1Q9UEE9 299 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 ZMYND8Q9ULU4 1186 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 FAM50BQ9Y247 325 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 HEMK1Q9Y5R4 338 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 HS3ST3B1Q9Y662 390 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 RRBP1Q9P2E9 1410 aaKnown RBP6.41□□□□□ -1.38
CCDC39-202ENST00000471307 ABCC10Q5T3U5 1492 aa6.41□□□□□ -1.38
CCDC39-202ENST00000471307 MAPKBP1O60336 1514 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
CCDC39-202ENST00000471307 INSIG1O15503 277 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 NTN1O95631 604 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 VIPP01282 170 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 RPS6KB1P23443 525 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 CPA2P48052 419 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 ME1P48163 572 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 NSUN2Q08J23 767 aaKnown RBP eCLIP6.4□□□□□ -1.38
CCDC39-202ENST00000471307 GLE1Q53GS7 698 aaKnown RBP6.4□□□□□ -1.38
CCDC39-202ENST00000471307 PJA1Q8NG27 643 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 OR52L2PQ8NGH6 319 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 GLMPQ8WWB7 406 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 IGFBPL1Q8WX77 278 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 PIGKQ92643 395 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 AKAP1Q92667 903 aaKnown RBP eCLIP6.4□□□□□ -1.38
CCDC39-202ENST00000471307 GRAMD1AQ96CP6 724 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 POT1Q9NUX5 634 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 CA14Q9ULX7 337 aa6.4□□□□□ -1.38
CCDC39-202ENST00000471307 SPATA31A5Q5VU36 1347 aa6.4□□□□□ -1.39
CCDC39-202ENST00000471307 SPATA31A7Q8IWB4 1347 aa6.4□□□□□ -1.39
CCDC39-202ENST00000471307 FGD6Q6ZV73 1430 aa6.4□□□□□ -1.39
CCDC39-202ENST00000471307 GPATCH8Q9UKJ3 1502 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms