RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 FBRSQ9HAH7 460 aa13.11□□□□□ -0.31
HIGD1A-205ENST00000470543 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
HIGD1A-205ENST00000470543 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
HIGD1A-205ENST00000470543 PLA2G4CQ9UP65 541 aa13.11□□□□□ -0.31
HIGD1A-205ENST00000470543 FAM47DPA6NHR8 397 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 TIMM44O43615 452 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 CTSKP43235 329 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 CASP4P49662 377 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 AP3M2P53677 418 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 TARDBPQ13148 414 aaKnown RBP eCLIP13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 UNC93AQ86WB7 457 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 ZNF366Q8N895 744 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 C12orf29Q8N999 325 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 PIWIL1Q96J94 861 aaKnown RBP13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 SLC2A11Q9BYW1 496 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 NRSN2Q9GZP1 204 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 SDCBP2Q9H190 292 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 SGK2Q9HBY8 427 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 NCKAP1Q9Y2A7 1128 aa13.1□□□□□ -0.31
HIGD1A-205ENST00000470543 A0A1B0GTQ1 180 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 CBX4O00257 560 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 YKT6O15498 198 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 KLKB1P03952 638 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 C1SP09871 688 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 HOXD13P35453 343 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 ACTN2P35609 894 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 AMPD3Q01432 767 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 KIAA0895LQ68EN5 471 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 SNIP1Q8TAD8 396 aaKnown RBP13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 CYB5D2Q8WUJ1 264 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 LGMNQ99538 433 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 ELF4Q99607 663 aaPredicted RBP13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 PNPLA8Q9NP80 782 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 AASDHPPTQ9NRN7 309 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 AGO1Q9UL18 857 aaKnown RBP13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 KALRNO60229 2985 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 ZNF462Q96JM2 2506 aa13.09□□□□□ -0.31
HIGD1A-205ENST00000470543 A0A087X0B3 334 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 SLC12A8A0AV02 714 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 VILLO15195 856 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 PAPSS1O43252 624 aaPredicted RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 TGFB1I1O43294 461 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 BRINP1O60477 761 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 TSPAN3O60637 253 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 ARRB1P49407 418 aaPredicted RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 RACK1P63244 317 aaKnown RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 SGSM1Q2NKQ1 1148 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 KCNT1Q5JUK3 1230 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 BROXQ5VW32 411 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 ZNF776Q68DI1 518 aaPredicted RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 CHST9Q7L1S5 443 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 CPXM2Q8N436 756 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 EID2Q8N6I1 236 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 ZNF507Q8TCN5 953 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 FGF11Q92914 225 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 P2RY11Q96G91 374 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 TMEM176AQ96HP8 235 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 SLC6A18Q96N87 628 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 HNRNPABQ99729 332 aaKnown RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 CLIC5Q9NZA1 410 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 CGNQ9P2M7 1197 aaKnown RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.32
HIGD1A-205ENST00000470543 ERVH48-1M5A8F1 160 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 ACADVLP49748 655 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 KIF11P52732 1056 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 RPS14P62263 151 aaKnown RBP13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 SFSWAPQ12872 951 aaKnown RBP13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 RTP5Q14D33 572 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 MPPE1Q53F39 396 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 SLC45A4Q5BKX6 768 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 PRAMEF14Q5SWL7 426 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 EPM2AIP1Q7L775 607 aaPredicted RBP13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 AHI1Q8N157 1196 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 CRYBG2Q8N1P7 616 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 ARHGAP18Q8N392 663 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 DHX58Q96C10 678 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 NT5C1AQ9BXI3 368 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 GDF3Q9NR23 364 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 CLEC4EQ9ULY5 219 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 MAST4O15021 2626 aa13.07□□□□□ -0.32
HIGD1A-205ENST00000470543 A0A1W2PPC4 97 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms