RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 VRTNQ9H8Y1 702 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 HMGXB4Q9UGU5 601 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 CLEC4EQ9ULY5 219 aa19.89■□□□□ 0.77
NCKIPSD-209ENST00000470006 NAV2Q8IVL1 2488 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 TP53BP1Q12888 1972 aaPredicted RBP19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 MYLKQ15746 1914 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 TEX51A0A1B0GUA7 166 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 TSPAN3O60637 253 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CDK4P11802 303 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 PSEN1P49768 467 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CXADRP78310 365 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CCDC173Q0VFZ6 552 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CAMK2GQ13555 558 aaPredicted RBP19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 TTC31Q49AM3 519 aaPredicted RBP19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 TAF1BQ53T94 588 aaPredicted RBP19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 HES3Q5TGS1 186 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CLEC20AQ6ZU45 233 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CRYBG2Q8N1P7 616 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CYB5D2Q8WUJ1 264 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 SKA1Q96BD8 255 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 CDK5RAP1Q96SZ6 601 aaKnown RBP19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 ARID3AQ99856 593 aa19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 AGO1Q9UL18 857 aaKnown RBP19.88■□□□□ 0.77
NCKIPSD-209ENST00000470006 A0A1B0GTQ1 180 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 CAPN8A6NHC0 703 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 STX6O43752 255 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 C1SP09871 688 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 AP3M2P53677 418 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 SNRPFP62306 86 aaKnown RBP19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 FAM26FQ5R3K3 315 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 TMEM215Q68D42 235 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 RSRC2Q7L4I2 434 aaKnown RBP19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 UNC93AQ86WB7 457 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 EID2Q8N6I1 236 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 FGF11Q92914 225 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 CYFIP2Q96F07 1278 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 SLC2A11Q9BYW1 496 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 NRSN2Q9GZP1 204 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 GZF1Q9H116 711 aaPredicted RBP19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 SGK2Q9HBY8 427 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 NCKAP1Q9Y2A7 1128 aa19.87■□□□□ 0.77
NCKIPSD-209ENST00000470006 HHLA1C9JL84 531 aa19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 RPS14P62263 151 aaKnown RBP19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 AMPD3Q01432 767 aa19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 SGSM1Q2NKQ1 1148 aa19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 EPM2AIP1Q7L775 607 aaPredicted RBP19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 SCD5Q86SK9 330 aa19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 ELF4Q99607 663 aaPredicted RBP19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 HNRNPABQ99729 332 aaKnown RBP19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 TNMDQ9H2S6 317 aa19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 STRIP2Q9ULQ0 834 aa19.86■□□□□ 0.77
NCKIPSD-209ENST00000470006 SLC12A8A0AV02 714 aa19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 LRRIQ3A6PVS8 624 aaPredicted RBP19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 PAPSS1O43252 624 aaPredicted RBP19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 KIF11P52732 1056 aa19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 RACK1P63244 317 aaKnown RBP19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 FAM173BQ6P4H8 233 aa19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 TMEM176AQ96HP8 235 aa19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 SLC6A18Q96N87 628 aa19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 AASDHPPTQ9NRN7 309 aa19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 MARCH2Q9P0N8 246 aa19.85■□□□□ 0.77
NCKIPSD-209ENST00000470006 UBE4BO95155 1302 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 VILLO15195 856 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 BRINP1O60477 761 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 VNN1O95497 513 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 C4BPAP04003 597 aaKnown RBP19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 ACTN2P35609 894 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 ZBTB16Q05516 673 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 RTP5Q14D33 572 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 MPPE1Q53F39 396 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 KIAA0895LQ68EN5 471 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 CHST9Q7L1S5 443 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 CCDC186Q7Z3E2 898 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 CPXM2Q8N436 756 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 RBBP8NLQ8NC74 664 aaPredicted RBP19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 SNIP1Q8TAD8 396 aaKnown RBP19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 PLEKHO2Q8TD55 490 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 FBRSQ9HAH7 460 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 PNPLA8Q9NP80 782 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 CLIC5Q9NZA1 410 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 TFIP11Q9UBB9 837 aaKnown RBP19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 PLXNA2O75051 1894 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 MGAQ8IWI9 3026 aa19.84■□□□□ 0.77
NCKIPSD-209ENST00000470006 COL5A1P20908 1838 aaPredicted RBP19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 CD2BP2O95400 341 aaKnown RBP19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 ACADVLP49748 655 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 ZNF776Q68DI1 518 aaPredicted RBP19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 SPOPLQ6IQ16 392 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 ZNF276Q8N554 614 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 WFIKKN2Q8TEU8 576 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 PARD3BQ8TEW8 1205 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 GOLGA1Q92805 767 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 LGMNQ99538 433 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 TMEM245Q9H330 911 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 PRSS16Q9NQE7 514 aa19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 CGNQ9P2M7 1197 aaKnown RBP19.83■□□□□ 0.77
NCKIPSD-209ENST00000470006 A0A1W2PPC4 97 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 RPN1P04843 607 aaKnown RBP19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 IGHV4-34P06331 123 aa19.82■□□□□ 0.76
NCKIPSD-209ENST00000470006 SAP25Q8TEE9 199 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms