RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 SERPIND1P05546 499 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 CDK16Q00536 496 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 EEF1DP3Q658K8 133 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 PKN3Q6P5Z2 889 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 LGI2Q8N0V4 545 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 KCNV2Q8TDN2 545 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 CCT8L2Q96SF2 557 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 RUBCNLQ9H714 662 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 GID8Q9NWU2 228 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 PRDM4Q9UKN5 801 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 ACOT9Q9Y305 439 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 ROBO1Q9Y6N7 1651 aa15.48■□□□□ 0.07
LIMS2-213ENST00000469300 POLR2LP62875 67 aaKnown RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 DLG4P78352 724 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 DGKZQ13574 1117 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 INPP5AQ14642 412 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 SH3D19Q5HYK7 790 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 C2orf49Q9BVC5 232 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 PCDHGC5Q9Y5F6 944 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 A0A0U1RQJ8 604 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 HNRNPH1P31943 449 aaKnown RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 MAPK8P45983 427 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 ZNF143P52747 638 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 RAD23BP54727 409 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 KLC1Q07866 573 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 SPDYE7PQ495Y7 208 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 MFSD7Q6UXD7 560 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 ZNF467Q7Z7K2 595 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 PHF13Q86YI8 300 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 SPATA20Q8TB22 786 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 LRRC39Q96DD0 335 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 ANLNQ9NQW6 1124 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 SMPD4Q9NXE4 827 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 DNALI1O14645 258 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 TRUB2O95900 331 aaKnown RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 USP17L7P0C7H9 530 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 SELPP16109 830 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 CHKAP35790 457 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 OCA2Q04671 838 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 METTL3Q86U44 580 aaKnown RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 CATSPER1Q8NEC5 780 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 HELQQ8TDG4 1101 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 ECT2Q9H8V3 914 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 PALMDQ9NP74 551 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 BTBD7Q9P203 1132 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 C5orf58C9J3I9 102 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 TGFB1I1O43294 461 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 BMP6P22004 513 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 CCL23P55773 120 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 KBTBD12Q3ZCT8 623 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 KLF6Q99612 283 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 TKTL2Q9H0I9 626 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 UBA2Q9UBT2 640 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-213ENST00000469300 LNPEPQ9UIQ6 1025 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 DNMT3LQ9UJW3 386 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 HES2Q9Y543 173 aa15.47■□□□□ 0.07
LIMS2-213ENST00000469300 PIGZQ86VD9 579 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 DHX33Q9H6R0 707 aaKnown RBP15.46■□□□□ 0.07
LIMS2-213ENST00000469300 NPHS2Q9NP85 383 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 BTNL10A8MVZ5 291 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 AMPD1P23109 780 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 PGM1P36871 562 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 LRRC8EQ6NSJ5 796 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 C16orf89Q6UX73 402 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 TSHZ1Q6ZSZ6 1077 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 SLC24A5Q71RS6 500 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 AGGF1Q8N302 714 aaeCLIP15.46■□□□□ 0.07
LIMS2-213ENST00000469300 GLIS3Q8NEA6 775 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 SPPL2BQ8TCT7 592 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 CLEC4DQ8WXI8 215 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 TLR10Q9BXR5 811 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 HIPK3Q9H422 1215 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 NMRK2Q9NPI5 230 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 UTP6Q9NYH9 597 aaKnown RBP15.46■□□□□ 0.07
LIMS2-213ENST00000469300 FAM153AQ9UHL3 310 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 MAFBQ9Y5Q3 323 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-213ENST00000469300 TRAV19A0A0A6YYK7 116 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 MOXD2PA6NHM9 499 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 SLCO1B7G3V0H7 640 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 ALDH1A2O94788 518 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 CYP1A2P05177 515 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 GLI1P08151 1106 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 ACADMP11310 421 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 PTPN7P35236 360 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 INPP1P49441 399 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 MTM1Q13496 603 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 CDC42EP4Q9H3Q1 356 aaKnown RBP15.46■□□□□ 0.07
LIMS2-213ENST00000469300 ASAH2Q9NR71 780 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 RNF112Q9ULX5 631 aa15.46■□□□□ 0.07
LIMS2-213ENST00000469300 ALDH18A1P54886 795 aaKnown RBP15.46■□□□□ 0.06
LIMS2-213ENST00000469300 ENPEPQ07075 957 aa15.46■□□□□ 0.06
LIMS2-213ENST00000469300 TEX9Q8N6V9 391 aa15.46■□□□□ 0.06
LIMS2-213ENST00000469300 ARL8AQ96BM9 186 aa15.46■□□□□ 0.06
LIMS2-213ENST00000469300 GRK2P25098 689 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 MIIPQ5JXC2 388 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 NUP93Q8N1F7 819 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms