RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 ARHGAP17Q68EM7 881 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 PM20D1Q6GTS8 502 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 C19orf48Q6RUI8 117 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 ANKS1BQ7Z6G8 1248 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 ZC3H3Q8IXZ2 948 aaKnown RBP12.83□□□□□ -0.36
HDAC3-204ENST00000469207 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 FBXL13Q8NEE6 735 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 C1orf216Q8TAB5 229 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 SETD7Q8WTS6 366 aaKnown RBP12.83□□□□□ -0.36
HDAC3-204ENST00000469207 UCMAQ8WVF2 138 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 PRCCQ92733 491 aaPredicted RBP12.83□□□□□ -0.36
HDAC3-204ENST00000469207 UBXN6Q9BZV1 441 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 MTG2Q9H4K7 406 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 C6orf106Q9H6K1 298 aaPredicted RBP12.83□□□□□ -0.36
HDAC3-204ENST00000469207 GAREM1Q9H706 876 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 SUSD2Q9UGT4 822 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 TSPAN16Q9UKR8 245 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 PLXNB3Q9ULL4 1909 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 FREM2Q5SZK8 3169 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 NUMA1Q14980 2115 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 FAM237AA0A1B0GTK4 181 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 GOLGA6L7A0A1B0GV03 622 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 A0A1B0GVT2 93 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 YJEFN3A6XGL0 299 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 E7ENQ6 273 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 H0Y626 953 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 BCAT2O15382 392 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 MSI1O43347 362 aaKnown RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 ZNF202O95125 648 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 TRIM16O95361 564 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 CYBBP04839 570 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 ACADMP11310 421 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 HOXD9P28356 352 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 RDXP35241 583 aaKnown RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 MXI1P50539 228 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 LRMPQ12912 555 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 TRIP4Q15650 581 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 ZNF423Q2M1K9 1284 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 HLA-BQ31612 363 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 BSPRYQ5W0U4 402 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 LAYNQ6UX15 382 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 SERPINA13PQ6UXR4 307 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 FAM217AQ8IXS0 508 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 CADM4Q8NFZ8 388 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 WFDC5Q8TCV5 224 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 ADAMTS14Q8WXS8 1223 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 ERCC4Q92889 916 aaPredicted RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 CDK5RAP1Q96SZ6 601 aaKnown RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 NUP58Q9BVL2 599 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 PCOLCE2Q9UKZ9 415 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 STRIP2Q9ULQ0 834 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
HDAC3-204ENST00000469207 FNDC3AQ9Y2H6 1198 aaKnown RBP12.82□□□□□ -0.36
HDAC3-204ENST00000469207 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 LCP1P13796 627 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 CD19P15391 556 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 GTF2H1P32780 548 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 PRCPP42785 496 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
HDAC3-204ENST00000469207 KRT85P78386 507 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 ARID5AQ03989 594 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 ADIGQ0VDE8 80 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 PNOCQ13519 176 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 MPPE1Q53F39 396 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 KCNT1Q5JUK3 1230 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 TCERG1LQ5VWI1 586 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 RFWD3Q6PCD5 774 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 CHST9Q7L1S5 443 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 ADIPOR2Q86V24 386 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 PROSER1Q86XN7 944 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 ARHGAP18Q8N392 663 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 OR2T3Q8NH03 318 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 SNX19Q92543 992 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
HDAC3-204ENST00000469207 TMA16Q96EY4 203 aaKnown RBP12.81□□□□□ -0.36
HDAC3-204ENST00000469207 TMEM245Q9H330 911 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 LRRC4Q9HBW1 653 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 TM7SF3Q9NS93 570 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 ABCB8Q9NUT2 735 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 BTBD3Q9Y2F9 522 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
HDAC3-204ENST00000469207 DSPP15924 2871 aaKnown RBP12.8□□□□□ -0.36
HDAC3-204ENST00000469207 FAM208BQ5VWN6 2430 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 XPO1O14980 1071 aaKnown RBP12.8□□□□□ -0.36
HDAC3-204ENST00000469207 NPC1O15118 1278 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 CETN3O15182 167 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 IGLV3-19P01714 112 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 ATXN1LP0C7T5 689 aaKnown RBP12.8□□□□□ -0.36
HDAC3-204ENST00000469207 OXTRP30559 389 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 RGS7P49802 495 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 ZNF132P52740 706 aa12.8□□□□□ -0.36
HDAC3-204ENST00000469207 CAMK2GQ13555 558 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms