RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 RING1Q06587 406 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 EIF4HQ15056 248 aaKnown RBP7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 GEN1Q17RS7 908 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 PPM1JQ5JR12 505 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 STPG1Q5TH74 334 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 NUGGCQ68CJ6 796 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 RNF43Q68DV7 783 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 KIAA1211LQ6NV74 962 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 MSANTD2Q6P1R3 559 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 DENND1BQ6P3S1 775 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 GJB7Q6PEY0 223 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 SLC36A4Q6YBV0 504 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 ARMCX6Q7L4S7 300 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 IRF2BP1Q8IU81 584 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 DEFB119Q8N690 84 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 CLEC4CQ8WTT0 213 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 FAM149B1Q96BN6 582 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 PIWIL1Q96J94 861 aaKnown RBP7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 SERPINB11Q96P15 392 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 DDX50Q9BQ39 737 aaKnown RBP7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 TRIM62Q9BVG3 475 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 SLC4A5Q9BY07 1137 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 CIPCQ9C0C6 399 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 NUP62CLQ9H1M0 184 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 THAP9Q9H5L6 903 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 ACP6Q9NPH0 428 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 THAP10Q9P2Z0 257 aaPredicted RBP7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 APEX2Q9UBZ4 518 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 DACH1Q9UI36 760 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 MBD1Q9UIS9 605 aaPredicted RBP7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 STOML2Q9UJZ1 356 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 CLEC4EQ9ULY5 219 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 PLA2G4CQ9UP65 541 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 NAALADL1Q9UQQ1 740 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 THADAQ6YHU6 1953 aa7.48□□□□□ -1.21
SNRPD3-205ENST00000468770 GOLGA6L7A0A1B0GV03 622 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 PES1O00541 588 aaKnown RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 IRAK2O43187 625 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 ACSL4O60488 711 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 TBL1XO60907 577 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 NDUFS2O75306 463 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 IGLV3-27P01718 113 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 FYNP06241 537 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 HOXD9P28356 352 aaPredicted RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 HLA-FP30511 346 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 DPP6P42658 865 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 IL12RB1P42701 662 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 RPL34P49207 117 aaKnown RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 SNX16P57768 344 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 YWHAZP63104 245 aaKnown RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 IRX4P78413 519 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 APBA1Q02410 837 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 PTK2Q05397 1052 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 ZNF234Q14588 700 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 MEA1Q16626 185 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 MAN2A1Q16706 1144 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 DPCR1Q3MIW9 517 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 FUT11Q495W5 492 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 VWA3BQ502W6 1294 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 TRIM61Q5EBN2 209 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 MPP7Q5T2T1 576 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 PIK3R6Q5UE93 754 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 SYPL2Q5VXT5 272 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 LYSMD4Q5XG99 296 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 RFWD3Q6PCD5 774 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 KIAA1324Q6UXG2 1013 aaKnown RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 SERPINA13PQ6UXR4 307 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 TMEM110Q86TL2 294 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 SYT12Q8IV01 421 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 CCDC117Q8IWD4 279 aaPredicted RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 ZNF557Q8N988 423 aaPredicted RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 ADAM32Q8TC27 787 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 DQX1Q8TE96 717 aaKnown RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 SORCS1Q8WY21 1168 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 AZIN2Q96A70 460 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 MRGPRX1Q96LB2 322 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 TUBGCP2Q9BSJ2 902 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 EDEM2Q9BV94 578 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 NUSAP1Q9BXS6 441 aaKnown RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 IRX2Q9BZI1 471 aaPredicted RBP7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 SLC6A17Q9H1V8 727 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 NDST4Q9H3R1 872 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 PRDM16Q9HAZ2 1276 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 CD248Q9HCU0 757 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 ABCB8Q9NUT2 735 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 DNAJC12Q9UKB3 198 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 CYP8B1Q9UNU6 501 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 TLR6Q9Y2C9 796 aa7.47□□□□□ -1.21
SNRPD3-205ENST00000468770 CNOT1A5YKK6 2376 aaKnown RBP7.46□□□□□ -1.21
SNRPD3-205ENST00000468770 IGHV1OR15-9A0A0B4J2B8 117 aa7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 LNP1A1A4G5 178 aa7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 TYW5A2RUC4 315 aaKnown RBP7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 C4orf47A7E2U8 309 aa7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 BECN2A8MW95 431 aa7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 PATE3B3GLJ2 98 aa7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 E5RJQ4 531 aa7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 FOXN3O00409 490 aaPredicted RBP7.46□□□□□ -1.22
SNRPD3-205ENST00000468770 TM4SF5O14894 197 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms