RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 HLA-EP13747 358 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 ME1P48163 572 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 ZNF394Q53GI3 561 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 SLC2A11Q9BYW1 496 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 PCED1AQ9H1Q7 454 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 C6orf106Q9H6K1 298 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-207ENST00000468385 MARCH2Q9P0N8 246 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 TRAF3IP3Q9Y228 551 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 RAXQ9Y2V3 346 aa13.7□□□□□ -0.22
PTPN7-207ENST00000468385 FASNP49327 2511 aaKnown RBP13.7□□□□□ -0.22
PTPN7-207ENST00000468385 ANKRD11Q6UB99 2663 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-207ENST00000468385 SLC12A8A0AV02 714 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 CALUO43852 315 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-207ENST00000468385 ACSL1P33121 698 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 CSNK1EP49674 416 aaKnown RBP13.69□□□□□ -0.22
PTPN7-207ENST00000468385 CAMK2GQ13555 558 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-207ENST00000468385 E2F5Q15329 346 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 KIF19Q2TAC6 998 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 RAB41Q5JT25 222 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 FAM124AQ86V42 546 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 PIGZQ86VD9 579 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 MARCH9Q86YJ5 346 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 OR2T3Q8NH03 318 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 RHBDD1Q8TEB9 315 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 HNRNPLLQ8WVV9 542 aaKnown RBP13.69□□□□□ -0.22
PTPN7-207ENST00000468385 CDC6Q99741 560 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 UBXN6Q9BZV1 441 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 LHX5Q9H2C1 402 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 DKK4Q9UBT3 224 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 BTBD3Q9Y2F9 522 aa13.69□□□□□ -0.22
PTPN7-207ENST00000468385 TIMM44O43615 452 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 F13A1P00488 732 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 NR2F2P24468 414 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 HLA-FP30511 346 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 AFF3P51826 1226 aaKnown RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 YWHAGP61981 247 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 TRIP4Q15650 581 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 NFIL3Q16649 462 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 ARHGAP17Q68EM7 881 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 INTS8Q75QN2 995 aaKnown RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 RSRC2Q7L4I2 434 aaKnown RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 BHLHA9Q7RTU4 235 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 ARHGAP18Q8N392 663 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 SLC4A11Q8NBS3 891 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 CYB5D2Q8WUJ1 264 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 SNX19Q92543 992 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 PLD4Q96BZ4 506 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 HEXIM2Q96MH2 286 aaKnown RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 ARID3AQ99856 593 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 TMEM245Q9H330 911 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 TMEM8AQ9HCN3 771 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 OSGEPQ9NPF4 335 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 STRIP2Q9ULQ0 834 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 SNX11Q9Y5W9 270 aa13.68□□□□□ -0.22
PTPN7-207ENST00000468385 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-207ENST00000468385 GOLGA8CPA6NN73 597 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 ZSCAN22P10073 491 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-207ENST00000468385 TKTL1P51854 596 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 RAD23BP54727 409 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 ARID5AQ03989 594 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 ENPEPQ07075 957 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 SUZ12Q15022 739 aaKnown RBP13.67□□□□□ -0.22
PTPN7-207ENST00000468385 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 PM20D1Q6GTS8 502 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 ZNF366Q8N895 744 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 NDRG1Q92597 394 aaKnown RBP13.67□□□□□ -0.22
PTPN7-207ENST00000468385 SEMA4DQ92854 862 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 TMEM176AQ96HP8 235 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 BBC3Q96PG8 261 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-207ENST00000468385 ULBP1Q9BZM6 244 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 TM9SF3Q9HD45 589 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 CISHQ9NSE2 258 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 RCOR1Q9UKL0 485 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 ANKRD6Q9Y2G4 727 aa13.67□□□□□ -0.22
PTPN7-207ENST00000468385 TULP2O00295 520 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 KCNK3O14649 394 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 TSPAN3O60637 253 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 ZBED1O96006 694 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 MYL1P05976 194 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 KRT13P13646 458 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 GRIA4P48058 902 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 MCCD1P59942 119 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-207ENST00000468385 RPS14P62263 151 aaKnown RBP13.66□□□□□ -0.22
PTPN7-207ENST00000468385 PDE4CQ08493 712 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 TEAD4Q15561 434 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 PTPRNQ16849 979 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 FNDC3BQ53EP0 1204 aaKnown RBP13.66□□□□□ -0.22
PTPN7-207ENST00000468385 KRT39Q6A163 491 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
PTPN7-207ENST00000468385 LAYNQ6UX15 382 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms