RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 YPEL5P62699 121 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 GHRHRQ02643 423 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 MAPKAPK3Q16644 382 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 PFKFB3Q16875 520 aaPredicted RBP4.33□□□□□ -1.72
VPS50-209ENST00000467326 ALFQ53S48 1182 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 INO80DQ53TQ3 878 aaPredicted RBP4.33□□□□□ -1.72
VPS50-209ENST00000467326 PAPD7Q5XG87 772 aaKnown RBP4.33□□□□□ -1.72
VPS50-209ENST00000467326 FAM90A2PQ658T7 463 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 ZNF425Q6IV72 752 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 GLIS1Q8NBF1 620 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 C1orf131Q8NDD1 294 aaKnown RBP4.33□□□□□ -1.72
VPS50-209ENST00000467326 PIGOQ8TEQ8 1089 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 SCARB1Q8WTV0 552 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 EIF3CQ99613 913 aaKnown RBP4.33□□□□□ -1.72
VPS50-209ENST00000467326 GDF15Q99988 308 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 TMEM8AQ9HCN3 771 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 ABHD10Q9NUJ1 306 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 NRBP1Q9UHY1 535 aa4.33□□□□□ -1.72
VPS50-209ENST00000467326 SPATA31A1Q5TZJ5 1347 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 ADAM10O14672 748 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 EPB41L2O43491 1005 aaKnown RBP4.32□□□□□ -1.72
VPS50-209ENST00000467326 SLC3A2P08195 630 aaKnown RBP4.32□□□□□ -1.72
VPS50-209ENST00000467326 PTGER1P34995 402 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 THBS4P35443 961 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 IGHMBP2P38935 993 aaKnown RBP4.32□□□□□ -1.72
VPS50-209ENST00000467326 HSPA7P48741 367 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 CFHR1Q03591 330 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 KCTD2Q14681 263 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 TRIP6Q15654 476 aaKnown RBP4.32□□□□□ -1.72
VPS50-209ENST00000467326 CNGA3Q16281 694 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 MPEG1Q2M385 716 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 P3H1Q32P28 736 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 PXDC1Q5TGL8 231 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 TLDC1Q6P9B6 456 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 SHC4Q6S5L8 630 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 CPXCR1Q8N123 301 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 ENAHQ8N8S7 591 aaPredicted RBP4.32□□□□□ -1.72
VPS50-209ENST00000467326 KIAA1191Q96A73 305 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 TNIP3Q96KP6 325 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 MYD88Q99836 296 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 NUDT22Q9BRQ3 303 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 NUAK2Q9H093 628 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 CHST12Q9NRB3 414 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 CA14Q9ULX7 337 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 VPS4AQ9UN37 437 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 PCDHGB2Q9Y5G2 931 aa4.32□□□□□ -1.72
VPS50-209ENST00000467326 INPPL1O15357 1258 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 MOSPD3O75425 235 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 SRGAP2BP0DMP2 458 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 MMP8P22894 467 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 NDUFS1P28331 727 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 DUSP1P28562 367 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 PLCD1P51178 756 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 ZNF91Q05481 1191 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 SEMA3BQ13214 749 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 ARL6IP4Q66PJ3 421 aaKnown RBP4.31□□□□□ -1.72
VPS50-209ENST00000467326 CCDC144NLQ6NUI1 221 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 C11orf87Q6NUJ2 197 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 RINLQ6ZS11 566 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 FAM43BQ6ZT52 329 aaPredicted RBP4.31□□□□□ -1.72
VPS50-209ENST00000467326 PIK3AP1Q6ZUJ8 805 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 ZNF354CQ86Y25 554 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 RASGRP3Q8IV61 690 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 CCDC89Q8N998 374 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 OR52L2PQ8NGH6 319 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 DEPTORQ8TB45 409 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 OVCA2Q8WZ82 227 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 AKAP1Q92667 903 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS50-209ENST00000467326 SGCZQ96LD1 299 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 FCRL5Q96RD9 977 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 NECTIN3Q9NQS3 549 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 RXFP3Q9NSD7 469 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 SEMA5BQ9P283 1151 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
VPS50-209ENST00000467326 FNDC1Q4ZHG4 1894 aaPredicted RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 ZNF521Q96K83 1311 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 CCDC187A0A096LP49 1063 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 J3KTA2 159 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 PPEF2O14830 753 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 PCDH17O14917 1159 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 HNRNPDLO14979 420 aaKnown RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 TCEA3O75764 348 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 LDHCP07864 332 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 VPS41P49754 854 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 RPS13P62277 151 aaKnown RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 HSF1Q00613 529 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 ID2Q02363 134 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 RABEP1Q15276 862 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 SLC9C1Q4G0N8 1177 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 ANO1Q5XXA6 986 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 TTLL5Q6EMB2 1281 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 KRT27Q7Z3Y8 459 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 SRLQ86TD4 932 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 TTC30AQ86WT1 665 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 SPICE1Q8N0Z3 855 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 NANOGP1Q8N7R0 232 aa4.3□□□□□ -1.72
VPS50-209ENST00000467326 IPO4Q8TEX9 1081 aaKnown RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
VPS50-209ENST00000467326 NEUROD6Q96NK8 337 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms