RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 KAT7O95251 611 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 GYPCP04921 128 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 TPM3P06753 285 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC2A3P11169 496 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 GZMAP12544 262 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 HNRNPH3P31942 346 aaKnown RBP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 GRIA2P42262 883 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 CCR3P51677 355 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 ARID5AQ03989 594 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 MTA1Q13330 715 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 PPP2R5DQ14738 602 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 ASIC2Q16515 512 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 ANO4Q32M45 955 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 PREPLQ4J6C6 727 aaPredicted RBP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 MPP7Q5T2T1 576 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 HGSNATQ68CP4 663 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 NADSYN1Q6IA69 706 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 TRNP1Q6NT89 227 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 PPP1R2P3Q6NXS1 205 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 MMS22LQ6ZRQ5 1243 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 Q6ZS52 159 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 ZNF571Q7Z3V5 609 aaPredicted RBP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 TERB1Q8NA31 727 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC30A5Q8TAD4 765 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 USP33Q8TEY7 942 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 VCPIP1Q96JH7 1222 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 XPO6Q96QU8 1125 aaKnown RBP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 BBS2Q9BXC9 721 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC2A11Q9BYW1 496 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 SPATA6Q9NWH7 488 aaPredicted RBP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 CALCOCO1Q9P1Z2 691 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 DEC1Q9P2X7 70 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 STARD13Q9Y3M8 1113 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 MYO18AQ92614 2054 aaKnown RBP9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 ATG2BQ96BY7 2078 aa9.85□□□□□ -0.83
SDCCAG3-208ENST00000466579 NEDD8-MDP1E9PL57 170 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 K7ESF4 209 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 ATG13O75143 517 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 RNF40O75150 1001 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 GRAP2O75791 330 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 ENDOD1O94919 500 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 APODP05090 189 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 CALB1P05937 261 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 SP9P0CG40 484 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 HOXD9P28356 352 aaPredicted RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC6A4P31645 630 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 GBP1P32455 592 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 FLT3P36888 993 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 KIR2DL1P43626 348 aaPredicted RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 NSFP46459 744 aaKnown RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC11A2P49281 568 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 CXCR3P49682 368 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 MRPS21P82921 87 aaKnown RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 SLC25A52Q3SY17 297 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 HSF5Q4G112 596 aaPredicted RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 MPPE1Q53F39 396 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 C2CD6Q53TS8 623 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 ZC3H12AQ5D1E8 599 aaKnown RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 PPP1R15BQ5SWA1 713 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 FAM102AQ5T9C2 384 aaPredicted RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 PIK3R6Q5UE93 754 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 ACAD10Q6JQN1 1059 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 PKN3Q6P5Z2 889 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 TPGS1Q6ZTW0 290 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 KIAA0907Q7Z7F0 614 aaPredicted RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 VSTM4Q8IW00 320 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 C3orf20Q8ND61 904 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 LMLNQ96KR4 655 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 BTN2A3PQ96KV6 586 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 PRMT1Q99873 361 aaKnown RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 DDX50Q9BQ39 737 aaKnown RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 FAM126AQ9BYI3 521 aaPredicted RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 HAUS4Q9H6D7 363 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 ARHGEF4Q9NR80 690 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 DNAJC17Q9NVM6 304 aaKnown RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 ADAM22Q9P0K1 906 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 STAP1Q9ULZ2 295 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 BZW2Q9Y6E2 419 aaKnown RBP9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 VPS13AQ96RL7 3174 aa9.84□□□□□ -0.83
SDCCAG3-208ENST00000466579 C2CD4BA6NLJ0 364 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 SIGLEC16A6NMB1 481 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 PROB1E7EW31 1015 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 DDX3XO00571 662 aaKnown RBP eCLIP9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 TRIM24O15164 1050 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 AP5Z1O43299 807 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 LAMTOR5O43504 91 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 F9P00740 461 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 APOEP02649 317 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 CYBBP04839 570 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 TNFAIP3P21580 790 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 CCR1P32246 355 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 NBL1P41271 181 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 PTPN9P43378 593 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 CXCL12P48061 93 aa9.83□□□□□ -0.84
SDCCAG3-208ENST00000466579 SATB1Q01826 763 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms