RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TBX18O95935 607 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 KLRC2P26717 231 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 YWHAQP27348 245 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 PCK1P35558 622 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 TWF1Q12792 350 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 ACAP1Q15027 740 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 ZC3H12AQ5D1E8 599 aaKnown RBP19.31■□□□□ 0.68
CAPN3-209ENST00000466222 MFSD7Q6UXD7 560 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 SLC13A5Q86YT5 568 aaPredicted RBP19.31■□□□□ 0.68
CAPN3-209ENST00000466222 KATNAL2Q8IYT4 538 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 SCML4Q8N228 414 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 FBXO32Q969P5 355 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 TGS1Q96RS0 853 aaKnown RBP19.31■□□□□ 0.68
CAPN3-209ENST00000466222 STMN4Q9H169 189 aaPredicted RBP19.31■□□□□ 0.68
CAPN3-209ENST00000466222 ANLNQ9NQW6 1124 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 GRHL1Q9NZI5 618 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 SFMBT1Q9UHJ3 866 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 LZTS1Q9Y250 596 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.31■□□□□ 0.68
CAPN3-209ENST00000466222 NLRC5Q86WI3 1866 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 KRT1P04264 644 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 KRT10P13645 584 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 SEC24CP53992 1094 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 LRRC38Q5VT99 294 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 CCDC137Q6PK04 289 aaKnown RBP19.31■□□□□ 0.68
CAPN3-209ENST00000466222 BNIPLQ7Z465 357 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 CCDC50Q8IVM0 306 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 MAIP1Q8WWC4 291 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 SLCO2A1Q92959 643 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 PPANQ9NQ55 473 aaKnown RBP19.31■□□□□ 0.68
CAPN3-209ENST00000466222 SNX24Q9Y343 169 aa19.31■□□□□ 0.68
CAPN3-209ENST00000466222 FAM92AA1XBS5 289 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 LRRD1A4D1F6 860 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 I6L893 689 aaPredicted RBP19.3■□□□□ 0.68
CAPN3-209ENST00000466222 PER2O15055 1255 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 PRPSAP2O60256 369 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 HMGA1P17096 107 aaKnown RBP19.3■□□□□ 0.68
CAPN3-209ENST00000466222 ELF1P32519 619 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 COILP38432 576 aaPredicted RBP19.3■□□□□ 0.68
CAPN3-209ENST00000466222 PLTPP55058 493 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 HADHQ16836 314 aaKnown RBP19.3■□□□□ 0.68
CAPN3-209ENST00000466222 BTBD8Q5XKL5 378 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 LILRA6Q6PI73 481 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 C6orf89Q6UWU4 347 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 TAC4Q86UU9 113 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 MON1AQ86VX9 555 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 DQX1Q8TE96 717 aaKnown RBP19.3■□□□□ 0.68
CAPN3-209ENST00000466222 ARNTL2Q8WYA1 636 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 P3H4Q92791 437 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 CASP10Q92851 521 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 EPB41L4BQ9H329 900 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 FBXO44Q9H4M3 255 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.3■□□□□ 0.68
CAPN3-209ENST00000466222 DDIT4Q9NX09 232 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 RWDD3Q9Y3V2 267 aa19.3■□□□□ 0.68
CAPN3-209ENST00000466222 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 EPOPA6NHQ4 379 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 C3orf70A6NLC5 250 aaPredicted RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 MDM4O15151 490 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 MSI1O43347 362 aaKnown RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 RALAP11233 206 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 ALDH1A3P47895 512 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 ERVK-21P61565 698 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 DEUP1Q05D60 604 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 C6orf118Q5T5N4 469 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 SUGP1Q8IWZ8 645 aaKnown RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 TCEAL8Q8IYN2 117 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 CNPY4Q8N129 248 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 PYROXD2Q8N2H3 581 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 FBXO25Q8TCJ0 367 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 SNRNP25Q9BV90 132 aaKnown RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 LRRC19Q9H756 370 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 ACTR5Q9H9F9 607 aaPredicted RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 STK39Q9UEW8 545 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 STAP1Q9ULZ2 295 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 INSL5Q9Y5Q6 135 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 IRAK3Q9Y616 596 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 AGTP01019 485 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 MMRN1Q13201 1228 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 GPM6BQ13491 265 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 KAZNQ674X7 775 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 STRADAQ7RTN6 431 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 POLNQ7Z5Q5 900 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 RBM23Q86U06 439 aaKnown RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 GPR65Q8IYL9 337 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 EXD1Q8NHP7 514 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 SLITRK1Q96PX8 696 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 WDR6Q9NNW5 1121 aaKnown RBP19.29■□□□□ 0.68
CAPN3-209ENST00000466222 ABCC13Q9NSE7 274 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 SSX2IPQ9Y2D8 614 aa19.29■□□□□ 0.68
CAPN3-209ENST00000466222 RFXAPO00287 272 aa19.28■□□□□ 0.68
CAPN3-209ENST00000466222 ENDOD1O94919 500 aa19.28■□□□□ 0.68
CAPN3-209ENST00000466222 RTN3O95197 1032 aaPredicted RBP19.28■□□□□ 0.68
CAPN3-209ENST00000466222 RB1P06400 928 aa19.28■□□□□ 0.68
CAPN3-209ENST00000466222 RARGP13631 454 aa19.28■□□□□ 0.68
CAPN3-209ENST00000466222 RPL21P46778 160 aaKnown RBP19.28■□□□□ 0.68
CAPN3-209ENST00000466222 SYDE1Q6ZW31 735 aaPredicted RBP19.28■□□□□ 0.68
CAPN3-209ENST00000466222 KCTD6Q8NC69 237 aa19.28■□□□□ 0.68
CAPN3-209ENST00000466222 ART4Q93070 314 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms