RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 YJEFN3A6XGL0 299 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 E7ENQ6 273 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 TIMM44O43615 452 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 HARS2P49590 506 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 DAOAP59103 153 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 GFPT1Q06210 699 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 SEMA3BQ13214 749 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 STILQ15468 1287 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 UAP1L1Q3KQV9 507 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 FUT11Q495W5 492 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 MPPE1Q53F39 396 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 MSANTD2Q6P1R3 559 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 SIX6OS1Q8N1H7 587 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 TRIML1Q8N9V2 468 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 RNF139Q8WU17 664 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 IRGQQ8WZA9 623 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 NDRG1Q92597 394 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 HSPA12BQ96MM6 686 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 NT5C1BQ96P26 610 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 SLC6A17Q9H1V8 727 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 SLC32A1Q9H598 525 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 PRDM16Q9HAZ2 1276 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 CD93Q9NPY3 652 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 ITM2CQ9NQX7 267 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 WSB2Q9NYS7 404 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 SUSD2Q9UGT4 822 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 CLEC4EQ9ULY5 219 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 NFE2L3Q9Y4A8 694 aa13.02□□□□□ -0.33
SOX2-OT-203ENST00000466034 ADAMTS9Q9P2N4 1935 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 NDUFS2O75306 463 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 KRT37O76014 449 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 CFIP05156 583 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 NCAM1P13591 858 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 HOXD9P28356 352 aaPredicted RBP13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 CD6P30203 668 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 MAPK8P45983 427 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 LRMPQ12912 555 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 ZNF234Q14588 700 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 CNGA2Q16280 664 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 WDR45BQ5MNZ6 344 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 SYCP2LQ5T4T6 812 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 TMEM215Q68D42 235 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 TTI2Q6NXR4 508 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 KIAA1324Q6UXG2 1013 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 KIAA0907Q7Z7F0 614 aaPredicted RBP13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 DEFB119Q8N690 84 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 DEFB124Q8NES8 71 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 LMO3Q8TAP4 145 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 WFIKKN2Q8TEU8 576 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 SLC35F5Q8WV83 523 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 TFAP2BQ92481 460 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 MKRN2Q9H000 416 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 MAN1B1Q9UKM7 699 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 FRYQ5TBA9 3013 aa13.01□□□□□ -0.33
SOX2-OT-203ENST00000466034 MUC22E2RYF6 1773 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-203ENST00000466034 SYNCRIPO60506 623 aaKnown RBP13□□□□□ -0.33
SOX2-OT-203ENST00000466034 OPHN1O60890 802 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 IGLV3-27P01718 113 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 SYPP08247 313 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 OXTRP30559 389 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 COPAP53621 1224 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 ATXN3P54252 364 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-203ENST00000466034 GCNT1Q02742 428 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 CETN1Q12798 172 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 CCDC40Q4G0X9 1142 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 ADGRF1Q5T601 910 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 PMF1Q6P1K2 205 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 TMPRSS6Q8IU80 811 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 HDDC3Q8N4P3 179 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 CADM4Q8NFZ8 388 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 DNASE2BQ8WZ79 361 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 EDEM1Q92611 657 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 AZIN2Q96A70 460 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 SIPA1Q96FS4 1042 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 HSFY1Q96LI6 401 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 ZSWIM1Q9BR11 485 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 DNAAF2Q9NVR5 837 aaKnown RBP13□□□□□ -0.33
SOX2-OT-203ENST00000466034 SFMBT1Q9UHJ3 866 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
SOX2-OT-203ENST00000466034 BICDL2A1A5D9 508 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 KCNJ18B7U540 433 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 RNF225M0QZC1 329 aaPredicted RBP12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 HAX1O00165 279 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 GJB3O75712 270 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 GABBR2O75899 941 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 FBXO21O94952 628 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 PROS1P07225 676 aa12.99□□□□□ -0.33
SOX2-OT-203ENST00000466034 LCP1P13796 627 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms