RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ZC3H12AQ5D1E8 599 aaKnown RBP21.12■□□□□ 0.97
SKA3-205ENST00000465471 DGKKQ5KSL6 1271 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 RNF43Q68DV7 783 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 NADSYN1Q6IA69 706 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 TPGS1Q6ZTW0 290 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 TMC6Q7Z403 805 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 JOSD2Q8TAC2 188 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 EXOC4Q96A65 974 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 TBCBQ99426 244 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 BBS2Q9BXC9 721 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 ISCUQ9H1K1 167 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 TMEM51Q9NW97 253 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.12■□□□□ 0.97
SKA3-205ENST00000465471 NENFQ9UMX5 172 aa21.12■□□□□ 0.97
SKA3-205ENST00000465471 C2CD4BA6NLJ0 364 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 SIGLEC16A6NMB1 481 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 NEDD8-MDP1E9PL57 170 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 M0QYT0 321 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 RTN2O75298 545 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 GJB6O95452 261 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 TYRP14679 529 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 DRD1P21728 446 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 RRM1P23921 792 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 SLC6A4P31645 630 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 SLC6A11P48066 632 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 SLC11A2P49281 568 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 SULT1E1P49888 294 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 MESP2Q0VG99 397 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 GRSF1Q12849 480 aaKnown RBP eCLIP21.11■□□□□ 0.97
SKA3-205ENST00000465471 LRRC32Q14392 662 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 PPP2R5DQ14738 602 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 ANO4Q32M45 955 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 PHLDB2Q86SQ0 1253 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 SYNPOQ8N3V7 929 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 EMC1Q8N766 993 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 CHRDQ9H2X0 955 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 PIGVQ9NUD9 493 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 ADAMTS1Q9UHI8 967 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 FBXO10Q9UK96 956 aa21.11■□□□□ 0.97
SKA3-205ENST00000465471 A0A0A0MRY4 1105 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 TMCO5BA8MYB1 307 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.1■□□□□ 0.97
SKA3-205ENST00000465471 TULP3O75386 442 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 ENDOD1O94919 500 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 APOEP02649 317 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 FTLP02792 175 aaPredicted RBP21.1■□□□□ 0.97
SKA3-205ENST00000465471 TPM1P09493 284 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 SLC2A3P11169 496 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 KRT3P12035 628 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 CCR1P32246 355 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 PTPN9P43378 593 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 CXCR3P49682 368 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 PLEKHA7Q6IQ23 1121 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 VPS36Q86VN1 386 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 CNGA4Q8IV77 575 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 RXFP2Q8WXD0 754 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 BTN2A3PQ96KV6 586 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 CFAP57Q96MR6 1250 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 IER2Q9BTL4 223 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 LMAN1LQ9HAT1 526 aa21.1■□□□□ 0.97
SKA3-205ENST00000465471 RBM12Q9NTZ6 932 aaKnown RBP21.1■□□□□ 0.97
SKA3-205ENST00000465471 XPO7Q9UIA9 1087 aaKnown RBP21.1■□□□□ 0.97
SKA3-205ENST00000465471 A0A087X0T9 212 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 F9P00740 461 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 EGFP01133 1207 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 FAM228BP0C875 321 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 CHRM1P11229 460 aaPredicted RBP21.09■□□□□ 0.97
SKA3-205ENST00000465471 RFC1P35251 1148 aaPredicted RBP21.09■□□□□ 0.97
SKA3-205ENST00000465471 ADKP55263 362 aaKnown RBP21.09■□□□□ 0.97
SKA3-205ENST00000465471 NME3Q13232 169 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
SKA3-205ENST00000465471 ASTE1Q2TB18 679 aaPredicted RBP21.09■□□□□ 0.97
SKA3-205ENST00000465471 CCDC14Q49A88 953 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 PIK3R6Q5UE93 754 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 DNAJC24Q6P3W2 148 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 DNAAF5Q86Y56 855 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 DTWD2Q8NBA8 298 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 PNKPQ96T60 521 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 SELENOOQ9BVL4 669 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 ARHGEF38Q9NXL2 777 aa21.09■□□□□ 0.97
SKA3-205ENST00000465471 SYNJ2BP-COX16A0A087WUM0 186 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 GOLGA6L7A0A1B0GV03 622 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 SSU72P8A0A1W2PR75 194 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 AKR1B15C9JRZ8 316 aaPredicted RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 I6L893 689 aaPredicted RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 MOCS2O96007 188 aaPredicted RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 PDGFRAP16234 1089 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 HOXD9P28356 352 aaPredicted RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 SGSHP51688 502 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 MTA1Q13330 715 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 MAMLD1Q13495 774 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 GAS6Q14393 721 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 FBXO43Q4G163 708 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 MPPE1Q53F39 396 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 BRMS1LQ5PSV4 323 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 MPP7Q5T2T1 576 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 MAMSTRQ6ZN01 415 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 NAT16Q8N8M0 369 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 ATP6V0D2Q8N8Y2 350 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 TC2NQ8N9U0 490 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms