RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DUOXA2Q1HG44 320 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 ZNF699Q32M78 642 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 SUPT20HL1Q3ZLR7 823 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 NADK2Q4G0N4 442 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 FAXCQ5TGI0 409 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 FKBP1CQ5VVH2 108 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 METTL21CQ5VZV1 264 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 SLC9A4Q6AI14 798 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 TRMT10BQ6PF06 316 aaKnown RBP7.52□□□□□ -1.21
USP48-206ENST00000464577 FAM43BQ6ZT52 329 aaPredicted RBP7.52□□□□□ -1.21
USP48-206ENST00000464577 FRMD7Q6ZUT3 714 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 CYP4V2Q6ZWL3 525 aaPredicted RBP7.52□□□□□ -1.21
USP48-206ENST00000464577 TICAM1Q8IUC6 712 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 CDKL3Q8IVW4 592 aaPredicted RBP7.52□□□□□ -1.21
USP48-206ENST00000464577 MAP7D3Q8IWC1 876 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 CPXCR1Q8N123 301 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 METTL25Q8N6Q8 603 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 PLD5Q8N7P1 536 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 ADCY4Q8NFM4 1077 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 SLC7A3Q8WY07 619 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 ATP2A3Q93084 1043 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 CDHR1Q96JP9 859 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 GCNAQ96QF7 691 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 CPXM1Q96SM3 734 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 CNPY3Q9BT09 278 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 MTMR12Q9C0I1 747 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 CYP4F11Q9HBI6 524 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP48-206ENST00000464577 TJP2Q9UDY2 1190 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 STK39Q9UEW8 545 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 BCAP29Q9UHQ4 241 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 LZTS1Q9Y250 596 aa7.52□□□□□ -1.21
USP48-206ENST00000464577 GPR25O00155 361 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 ADCY3O60266 1144 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 LGR5O75473 907 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 GCATO75600 419 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 SORBS2O94875 1100 aaKnown RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 APRTP07741 180 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 NR3C2P08235 984 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CD19P15391 556 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 DESP17661 470 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 GPD1P21695 349 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 RBL1P28749 1068 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 ACTR2P61160 394 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 ABCE1P61221 599 aaKnown RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 NIPAL4Q0D2K0 466 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 KLF10Q13118 480 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 KRT81Q14533 505 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CNGA3Q16281 694 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 TCHHL1Q5QJ38 904 aaPredicted RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 FAM182BQ5T319 152 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 SYCP2LQ5T4T6 812 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 C16orf89Q6UX73 402 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 TRIM74Q86UV6 250 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 TRIM73Q86UV7 250 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 DIS3LQ8TF46 1054 aaKnown RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 STON2Q8WXE9 905 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 TMEM143Q96AN5 459 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 SERPINI1Q99574 410 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 XYLT2Q9H1B5 865 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PNPOQ9NVS9 261 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 UBAP1Q9NZ09 502 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 TELO2Q9Y4R8 837 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 A0A0J9YVX5 310 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 DPYSL4O14531 572 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 SLC22A2O15244 555 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PRPSAP2O60256 369 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 ALDOAP04075 364 aaKnown RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 OATP04181 439 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PRKCGP05129 697 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 SETSIPP0DME0 302 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CDK4P11802 303 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 MLNP12872 115 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PROZP22891 400 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 MAGEA8P43361 318 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 NR1H2P55055 460 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 BCAR1P56945 870 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 MYBPC1Q00872 1141 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 DCTN2Q13561 401 aaKnown RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 SEMA5AQ13591 1074 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PDE1CQ14123 709 aaPredicted RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 MYLK3Q32MK0 819 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 C16orf46Q6P387 395 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 EPGNQ6UW88 154 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PACS1Q6VY07 963 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 SCARA5Q6ZMJ2 495 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 RSPH3Q86UC2 560 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 LRRC43Q8N309 656 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PQLC3Q8N755 202 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 GAB3Q8WWW8 586 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CDKL2Q92772 493 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 DLG3Q92796 817 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 LRGUKQ96M69 825 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PLEKHG4BQ96PX9 1271 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 TBCBQ99426 244 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 MMP19Q99542 508 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 ADPGKQ9BRR6 497 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 ZNF341Q9BYN7 854 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 BCO2Q9BYV7 579 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms