RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TRIM62Q9BVG3 475 aa22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 ELAC1Q9H777 363 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 TMPRSS4Q9NRS4 437 aa22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 FBXW11Q9UKB1 542 aa22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 CENPFP49454 3210 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 EEF2KO00418 725 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 BANF1O75531 89 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 MAGEA6P43360 314 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 OR1G1P47890 313 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 ARL13BQ3SXY8 428 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 FAM43BQ6ZT52 329 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 PIGWQ7Z7B1 504 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 SAMD15Q9P1V8 674 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 TANC1Q9C0D5 1861 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 MYO18AQ92614 2054 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 GPX6P59796 221 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 BBS9Q3SYG4 887 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 HEATR6Q6AI08 1181 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 BEND5Q7L4P6 421 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 CTU1Q7Z7A3 348 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 FAM126BQ8IXS8 530 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 FBXO36Q8NEA4 188 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 ADAM32Q8TC27 787 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 TFB1MQ8WVM0 346 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 DDIT4Q9NX09 232 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 SCN5AQ14524 2016 aa22.47■■□□□ 1.19
PDLIM2-216ENST00000464275 PLXNA3P51805 1871 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 CLUHO75153 1309 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 DNM1LO00429 736 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 CREB3O43889 395 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 GSTA1P08263 222 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 PPARDQ03181 441 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 NR1H3Q13133 447 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 PAFAH1B3Q15102 231 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 BSPRYQ5W0U4 402 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 CCDC110Q8TBZ0 833 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 SAGE1Q9NXZ1 904 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 SLC24A2Q9UI40 661 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 MFHAS1Q9Y4C4 1052 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 ACTL7BQ9Y614 415 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 TTC3P53804 2025 aa22.46■■□□□ 1.19
PDLIM2-216ENST00000464275 NBNO60934 754 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 OAZ2O95190 189 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 ATP2A2P16615 1042 aaKnown RBP22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 GCAP28676 217 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 HCAR3P49019 387 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 DPYSQ14117 519 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 PLEKHG4Q58EX7 1191 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 FBXW10Q5XX13 1052 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 RFX8Q6ZV50 586 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 PALM2Q8IXS6 379 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 DCP1BQ8IZD4 617 aaKnown RBP22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 CYP4X1Q8N118 509 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 CCT6BQ92526 530 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 EDEM1Q92611 657 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 FETUBQ9UGM5 382 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 TET1Q8NFU7 2136 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 FNDC1Q4ZHG4 1894 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 ENPP3O14638 875 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 MFSD11O43934 449 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 CXCR3P49682 368 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 ZNF135P52742 658 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 SEMA3BQ13214 749 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 RASA2Q15283 850 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 SWT1Q5T5J6 900 aaKnown RBP22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 CAPN12Q6ZSI9 719 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 COLEC11Q9BWP8 271 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 ZCWPW1Q9H0M4 648 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 ETNK1Q9HBU6 452 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 TBK1Q9UHD2 729 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 TRIM17Q9Y577 477 aa22.45■■□□□ 1.18
PDLIM2-216ENST00000464275 SHROOM3Q8TF72 1996 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 POC1B-GALNT4F8VUJ3 575 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 VPS52Q8N1B4 723 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 MCUQ8NE86 351 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 SH3TC2Q8TF17 1288 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 LRRN4Q8WUT4 740 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 HTR3CQ8WXA8 447 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 MAML1Q92585 1016 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 FERMT1Q9BQL6 677 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 WDR83Q9BRX9 315 aaKnown RBP22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 DNAJB4Q9UDY4 337 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 RABGEF1Q9UJ41 708 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 PCDHB7Q9Y5E2 793 aa22.44■■□□□ 1.18
PDLIM2-216ENST00000464275 DCLK1O15075 740 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 ZNF189O75820 626 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 RASSF9O75901 435 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 SSTR1P30872 391 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 GRIK1P39086 918 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 PDK1Q15118 436 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 TMED2Q15363 201 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 C3orf62Q6ZUJ4 267 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 PDZD4Q76G19 769 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 ABI1Q8IZP0 508 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 DBF4BQ8NFT6 615 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 PLCD4Q9BRC7 762 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 UNC93B1Q9H1C4 597 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 WDCPQ9H6R7 721 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 PRG3Q9Y2Y8 225 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms