RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ERMNQ8TAM6 284 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 PIP4K2CQ8TBX8 421 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 GIPC2Q8TF65 315 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 SLC22A17Q8WUG5 538 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 PGBD4Q96DM1 585 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 FIZ1Q96SL8 496 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 CDCA3Q99618 268 aaPredicted RBP5.85□□□□□ -1.47
CD46-211ENST00000464082 TMEM175Q9BSA9 504 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 TACO1Q9BSH4 297 aaKnown RBP5.85□□□□□ -1.47
CD46-211ENST00000464082 TTPALQ9BTX7 342 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 JAM3Q9BX67 310 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 HAPLN2Q9GZV7 340 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 TLE6Q9H808 572 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 UPF2Q9HAU5 1272 aaKnown RBP5.85□□□□□ -1.47
CD46-211ENST00000464082 PTPRHQ9HD43 1115 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 ENTPD7Q9NQZ7 604 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 PRMT7Q9NVM4 692 aaPredicted RBP5.85□□□□□ -1.47
CD46-211ENST00000464082 CEP72Q9P209 647 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 MTMR6Q9Y217 621 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 GIT1Q9Y2X7 761 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.85□□□□□ -1.47
CD46-211ENST00000464082 CLIC4Q9Y696 253 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 MIA3Q5JRA6 1907 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 COL4A2P08572 1712 aa5.85□□□□□ -1.47
CD46-211ENST00000464082 MYH10P35580 1976 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 NUP210Q8TEM1 1887 aaPredicted RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 PHLPP2Q6ZVD8 1323 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 VWA3AA6NCI4 1184 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 LOC730098B7Z3J9 87 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 H3BQV1 296 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 RECQL4O94761 1208 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 LTFP02788 710 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 SCG5P05408 212 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 EPCAMP16422 314 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 FAHP16930 419 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 SYT1P21579 422 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 BMP5P22003 454 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 ALDH7A1P49419 539 aaKnown RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 RRADP55042 308 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 FANCCQ00597 558 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 FOXL1Q12952 345 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 COL9A2Q14055 689 aaPredicted RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 SMC1AQ14683 1233 aaKnown RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 SF3A1Q15459 793 aaKnown RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 XKR4Q5GH76 650 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 ANKRD54Q6NXT1 300 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 ALKAL1Q6UXT8 129 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 EP400NLQ6ZTU2 488 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 TRIM48Q8IWZ4 208 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 OR6P1Q8NGX9 317 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 RABGGTAQ92696 567 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 KIFAP3Q92845 792 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 PLIN2Q99541 437 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 ACO2Q99798 780 aaKnown RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 NTPCRQ9BSD7 190 aaKnown RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 HERC2P3Q9BVR0 1158 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 APOL6Q9BWW8 343 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 ZNF703Q9H7S9 590 aaPredicted RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 SNTG2Q9NY99 539 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 PRKAG3Q9UGI9 489 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 FBXO2Q9UK22 296 aaPredicted RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 PRG3Q9Y2Y8 225 aaPredicted RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 REXO2Q9Y3B8 237 aaKnown RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 KIF3AQ9Y496 699 aa5.84□□□□□ -1.47
CD46-211ENST00000464082 USP15Q9Y4E8 981 aaPredicted RBP5.84□□□□□ -1.47
CD46-211ENST00000464082 CACNA1IQ9P0X4 2223 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 COL4A3Q01955 1670 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 A0A087X0B3 334 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.83□□□□□ -1.48
CD46-211ENST00000464082 FAM189A1O60320 539 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 MAFKO60675 156 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 CXCL14O95715 111 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 SOD2P04179 222 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 CNPP09543 421 aaKnown RBP5.83□□□□□ -1.48
CD46-211ENST00000464082 PLA2G4BP0C869 781 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 CLCN4P51793 760 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 ZNF131P52739 623 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 PEX3P56589 373 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 DSG1Q02413 1049 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 KRT17Q04695 432 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 RNASELQ05823 741 aaKnown RBP5.83□□□□□ -1.48
CD46-211ENST00000464082 GRIK3Q13003 919 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 PRPF4BQ13523 1007 aaKnown RBP5.83□□□□□ -1.48
CD46-211ENST00000464082 KARSQ15046 597 aaKnown RBP5.83□□□□□ -1.48
CD46-211ENST00000464082 PPP2R5AQ15172 486 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 MAPK6Q16659 721 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 SPECC1Q5M775 1068 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 ATF7IP2Q5U623 682 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 KRT79Q5XKE5 535 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 SLC39A4Q6P5W5 647 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 BRAPQ7Z569 592 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 ZBTB8OSQ8IWT0 167 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 ULK2Q8IYT8 1036 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 C12orf76Q8N812 135 aaPredicted RBP5.83□□□□□ -1.48
CD46-211ENST00000464082 TMEM161BQ8NDZ6 487 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 DEPTORQ8TB45 409 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 URGCPQ8TCY9 931 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 MICAL1Q8TDZ2 1067 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 PPP2R3CQ969Q6 453 aa5.83□□□□□ -1.48
CD46-211ENST00000464082 SNX21Q969T3 373 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms