RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 ASIC5Q9NY37 505 aa4.86□□□□□ -1.63
USP9X-204ENST00000463829 SRP68Q9UHB9 627 aaKnown RBP4.86□□□□□ -1.63
USP9X-204ENST00000463829 DAPP1Q9UN19 280 aa4.86□□□□□ -1.63
USP9X-204ENST00000463829 C19orf53Q9UNZ5 99 aaPredicted RBP4.86□□□□□ -1.63
USP9X-204ENST00000463829 SPATA31A1Q5TZJ5 1347 aa4.86□□□□□ -1.63
USP9X-204ENST00000463829 LOC105369274A0A096LPK9 316 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 LOC102723532A0A0G2JNH3 316 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 HMX3A6NHT5 357 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 TTC34A8MYJ7 566 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 M0QZQ0 153 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 FYB1O15117 783 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 IRAK2O43187 625 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 C1QL1O75973 258 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 MBPP02686 304 aaPredicted RBP4.85□□□□□ -1.63
USP9X-204ENST00000463829 THBS4P35443 961 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 CDK7P50613 346 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 ARL4CP56559 192 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 RAE1P78406 368 aaKnown RBP4.85□□□□□ -1.63
USP9X-204ENST00000463829 SF3A3Q12874 501 aaKnown RBP eCLIP4.85□□□□□ -1.63
USP9X-204ENST00000463829 RPS6KA2Q15349 733 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 AAK1Q2M2I8 961 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 FCRLBQ6BAA4 426 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 FBXO42Q6P3S6 717 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 VSTM1Q6UX27 236 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 DCDC5Q6ZRR9 648 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 OR4N4Q8N0Y3 316 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 MYRIPQ8NFW9 859 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 CPT1BQ92523 772 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 NPIPB3Q92617 1050 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 KAZALD1Q96I82 304 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 TRAPPC9Q96Q05 1148 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 POLR3GLQ9BT43 218 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 ABHD10Q9NUJ1 306 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 LIN7CQ9NUP9 197 aaKnown RBP4.85□□□□□ -1.63
USP9X-204ENST00000463829 KIF17Q9P2E2 1029 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 SERGEFQ9UGK8 458 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 ZBTB1Q9Y2K1 713 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 PCDHGB3Q9Y5G1 929 aa4.85□□□□□ -1.63
USP9X-204ENST00000463829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 SMIM22K7EJ46 135 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 NKX2-8O15522 239 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 FAM155BO75949 473 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 SLC3A2P08195 630 aaKnown RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 CHRM5P08912 532 aaPredicted RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 HSD3B1P14060 373 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 ATF7P17544 494 aaPredicted RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 FBLP22087 321 aaKnown RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 CCT5P48643 541 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 WDR5P61964 334 aaKnown RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 RBM6P78332 1123 aaKnown RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 PPFIA1Q13136 1202 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 RAPGEF1Q13905 1077 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 KCNB1Q14721 858 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 LARS2Q15031 903 aaKnown RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 TBRG1Q3YBR2 411 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 TTC22Q5TAA0 569 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 ANKRD40Q6AI12 368 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 C16orf89Q6UX73 402 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 CPXCR1Q8N123 301 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 OR6Y1Q8NGX8 325 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 C3orf49Q96BT1 292 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 HIC2Q96JB3 615 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 RNF26Q9BY78 433 aaPredicted RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 TAF1DQ9H5J8 278 aaPredicted RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 CDCP1Q9H5V8 836 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
USP9X-204ENST00000463829 NDUFAF4Q9P032 175 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 LUZP4Q9P127 313 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 SEMA5BQ9P283 1151 aa4.84□□□□□ -1.63
USP9X-204ENST00000463829 AOX1Q06278 1338 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 LRRC3CA6NJW4 275 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 SERPINA4P29622 427 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 BIRC3Q13489 604 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 TAF5Q15542 800 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 CNGA3Q16281 694 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 PROSER3Q2NL68 480 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 CERKLQ49MI3 558 aaPredicted RBP4.83□□□□□ -1.64
USP9X-204ENST00000463829 PRAMEF17Q5VTA0 474 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 WDR93Q6P2C0 686 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 RRAGAQ7L523 313 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 MOGAT3Q86VF5 341 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 CHSY1Q86X52 802 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 ZNF354CQ86Y25 554 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 ANKRD18AQ8IVF6 992 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 SMAP1Q8IYB5 467 aaPredicted RBP4.83□□□□□ -1.64
USP9X-204ENST00000463829 AKAP1Q92667 903 aaKnown RBP eCLIP4.83□□□□□ -1.64
USP9X-204ENST00000463829 SDCCAG3Q96C92 435 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 MECRQ9BV79 373 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 PRDM13Q9H4Q3 707 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 DGKBQ9Y6T7 804 aa4.83□□□□□ -1.64
USP9X-204ENST00000463829 SPATA31A6Q5VVP1 1343 aa4.82□□□□□ -1.64
USP9X-204ENST00000463829 TBC1D3DA0A087WVF3 549 aa4.82□□□□□ -1.64
USP9X-204ENST00000463829 TBC1D3IA0A087WXS9 549 aa4.82□□□□□ -1.64
USP9X-204ENST00000463829 TBC1D3EA0A087X179 549 aa4.82□□□□□ -1.64
USP9X-204ENST00000463829 TBC1D3KA0A087X1G2 549 aa4.82□□□□□ -1.64
USP9X-204ENST00000463829 TBC1D3BA6NDS4 549 aa4.82□□□□□ -1.64
USP9X-204ENST00000463829 TBC1D3FA6NER0 549 aaPredicted RBP4.82□□□□□ -1.64
USP9X-204ENST00000463829 SLC38A8A6NNN8 435 aa4.82□□□□□ -1.64
USP9X-204ENST00000463829 TBC1D3LB9A6J9 549 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms