RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 CC2D1AQ6P1N0 951 aaPredicted RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 H2AFVQ71UI9 128 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 ARCQ7LC44 396 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 TAC4Q86UU9 113 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 DDX42Q86XP3 938 aaKnown RBP eCLIP8.41□□□□□ -1.06
GPN1-206ENST00000461249 YAF2Q8IY57 180 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 CCDC170Q8IYT3 715 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 EMC1Q8N766 993 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 C3orf20Q8ND61 904 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 JOSD2Q8TAC2 188 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 RIN3Q8TB24 985 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 DEPDC1BQ8WUY9 529 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 RXFP2Q8WXD0 754 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 ZNF653Q96CK0 615 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 UHRF1Q96T88 793 aaPredicted RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 HINFPQ9BQA5 517 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 DDX23Q9BUQ8 820 aaKnown RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 TRMT61BQ9BVS5 477 aaKnown RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 THAP2Q9H0W7 228 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 SMOC2Q9H3U7 446 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 PARVAQ9NVD7 372 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 THG1LQ9NWX6 298 aaKnown RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 RRN3Q9NYV6 651 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 SEPT3Q9UH03 358 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 SH3BP1Q9Y3L3 701 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 HBS1LQ9Y450 684 aaKnown RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 PCDHGA11Q9Y5H2 935 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 EPN1Q9Y6I3 576 aaPredicted RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 COL6A3P12111 3177 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 EYSQ5T1H1 3165 aa8.41□□□□□ -1.06
GPN1-206ENST00000461249 HELZP42694 1942 aaKnown RBP8.41□□□□□ -1.06
GPN1-206ENST00000461249 SYNJ2BP-COX16A0A087WUM0 186 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 E2F8A0AVK6 867 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 C2CD4BA6NLJ0 364 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 M0QYT0 321 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 SCAMP3O14828 347 aaKnown RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 ZNF263O14978 683 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 NARSO43776 548 aaKnown RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 STC2O76061 302 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 CYP1A2P05177 515 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 PDGFRAP16234 1089 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 TFE3P19532 575 aaPredicted RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 GPD1P21695 349 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 GDI1P31150 447 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 RFC1P35251 1148 aaPredicted RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 CYLC1P35663 651 aaPredicted RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 MAGEA1P43355 309 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 SULT1E1P49888 294 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 RPL7AP62424 266 aaKnown RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 LSM11P83369 360 aaKnown RBP eCLIP8.4□□□□□ -1.06
GPN1-206ENST00000461249 FCHO2Q0JRZ9 810 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 MTF1Q14872 753 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 SPA17Q15506 151 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 TRIP4Q15650 581 aaPredicted RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 SLC25A52Q3SY17 297 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 CCDC14Q49A88 953 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 ARHGAP29Q52LW3 1261 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 C10orf76Q5T2E6 689 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 TRNP1Q6NT89 227 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 DCUN1D2Q6PH85 259 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 RAD9BQ6WBX8 426 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 HTR3DQ70Z44 454 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 TMEM139Q8IV31 216 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 OSCP1Q8WVF1 389 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 WNT2BQ93097 391 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 NT5C3BQ969T7 300 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 ARHGEF26Q96DR7 871 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 ZFYVE19Q96K21 471 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 CFAP57Q96MR6 1250 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 SERPINB11Q96P15 392 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 MCEEQ96PE7 176 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 TBCBQ99426 244 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 NPY6RQ99463 290 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 PACSIN1Q9BY11 444 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 LINC00597Q9H2U6 94 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 BRD9Q9H8M2 597 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 FAM204AQ9H8W3 233 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 MRPL47Q9HD33 250 aaKnown RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 DUS2Q9NX74 493 aaKnown RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 COX16Q9P0S2 106 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 LSM7Q9UK45 103 aaKnown RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 STAP1Q9ULZ2 295 aa8.4□□□□□ -1.06
GPN1-206ENST00000461249 DNMT3AQ9Y6K1 912 aaPredicted RBP8.4□□□□□ -1.06
GPN1-206ENST00000461249 TMEM191CA6NGB0 347 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 EIF3CLB5ME19 914 aaKnown RBP8.39□□□□□ -1.07
GPN1-206ENST00000461249 SLC9A3R1O14745 358 aaPredicted RBP8.39□□□□□ -1.07
GPN1-206ENST00000461249 CHADO15335 359 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 IRAK2O43187 625 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 GREM1O60565 184 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 NDUFA10O95299 355 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 LCA5LO95447 670 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 F9P00740 461 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 IGLV3-25P01717 112 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 IGLV3-27P01718 113 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 KLKB1P03952 638 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 TMEM253P0C7T8 217 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 CORO1AP31146 461 aaKnown RBP8.39□□□□□ -1.07
GPN1-206ENST00000461249 SDC4P31431 198 aa8.39□□□□□ -1.07
GPN1-206ENST00000461249 PTPN9P43378 593 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms