RNA–Protein interactions for RNA: ENST00000459628.5

GPHN-202, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 1,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-202ENST00000459628 PGAP3Q96FM1 320 aaPredicted RBP13.19□□□□□ -0.3
GPHN-202ENST00000459628 TRMT61BQ9BVS5 477 aaKnown RBP13.19□□□□□ -0.3
GPHN-202ENST00000459628 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 LINC00597Q9H2U6 94 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 LZTFL1Q9NQ48 299 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 ANLNQ9NQW6 1124 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 IGSF9Q9P2J2 1179 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 PCSK1NQ9UHG2 260 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 AGO1Q9UL18 857 aaKnown RBP13.19□□□□□ -0.3
GPHN-202ENST00000459628 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
GPHN-202ENST00000459628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
GPHN-202ENST00000459628 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 GOLGA6L7A0A1B0GV03 622 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 TRDMT1O14717 391 aaKnown RBP13.18□□□□□ -0.3
GPHN-202ENST00000459628 PJA2O43164 708 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 NARSO43776 548 aaKnown RBP13.18□□□□□ -0.3
GPHN-202ENST00000459628 PROSCO94903 275 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 GJC1P36383 396 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 TNK2Q07912 1038 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 EIF4EBP2Q13542 120 aaPredicted RBP13.18□□□□□ -0.3
GPHN-202ENST00000459628 PIGHQ14442 188 aaPredicted RBP13.18□□□□□ -0.3
GPHN-202ENST00000459628 Q6ZNB5 142 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 HTR3DQ70Z44 454 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 BNIPLQ7Z465 357 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 SLC44A3Q8N4M1 653 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 ARFGAP1Q8N6T3 406 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 CCDC185Q8N715 623 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 CENPIQ92674 756 aaPredicted RBP13.18□□□□□ -0.3
GPHN-202ENST00000459628 BHMTQ93088 406 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 EBF3Q9H4W6 596 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 BRD9Q9H8M2 597 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.18□□□□□ -0.3
GPHN-202ENST00000459628 PYCARDQ9ULZ3 195 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 HYOU1Q9Y4L1 999 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 SNX10Q9Y5X0 201 aa13.18□□□□□ -0.3
GPHN-202ENST00000459628 VCANP13611 3396 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 COL4A2P08572 1712 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 A0A0A6YYK5 440 aaPredicted RBP13.17□□□□□ -0.3
GPHN-202ENST00000459628 TSPAN3O60637 253 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 LRCH4O75427 683 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 MTA2O94776 668 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 ENDOD1O94919 500 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 MOCS3O95396 460 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 SLC2A3P11169 496 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 TCF4P15884 667 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 MIPP30301 263 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 SLC11A2P49281 568 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 BRMS1LQ5PSV4 323 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 RAP1GAP2Q684P5 730 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 NADSYN1Q6IA69 706 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 RFWD3Q6PCD5 774 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 RNF135Q8IUD6 432 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 OSCP1Q8WVF1 389 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 SIK2Q9H0K1 926 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 ZWILCHQ9H900 591 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 CD320Q9NPF0 282 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 GPATCH2LQ9NWQ4 482 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
GPHN-202ENST00000459628 KCNU1A8MYU2 1149 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 I6L893 689 aaPredicted RBP13.16□□□□□ -0.3
GPHN-202ENST00000459628 SLC9A3R1O14745 358 aaPredicted RBP13.16□□□□□ -0.3
GPHN-202ENST00000459628 PRPSAP2O60256 369 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 ACSL4O60488 711 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
GPHN-202ENST00000459628 PAGE1O75459 146 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 TNNT1P13805 278 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 SLC6A4P31645 630 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
GPHN-202ENST00000459628 TDGQ13569 410 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 SMTNL2Q2TAL5 461 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 EML3Q32P44 896 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 PIK3R6Q5UE93 754 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 TPGS1Q6ZTW0 290 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 CHSY1Q86X52 802 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 GJD3Q8N144 294 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 BTN2A3PQ96KV6 586 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 PEBP4Q96S96 227 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 TRMT1Q9NXH9 659 aaKnown RBP13.16□□□□□ -0.3
GPHN-202ENST00000459628 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 TBC1D14Q9P2M4 693 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 ZNF510Q9Y2H8 683 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 CHADO15335 359 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 KRT86O43790 486 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 TCEAL1Q15170 157 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
GPHN-202ENST00000459628 FAM133BQ5BKY9 247 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms