RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 PNPLA8Q9NP80 782 aa16.92■□□□□ 0.3
CAPN13-203ENST00000458085 NT5C1B-RDH14C9J2C7 533 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 DCLK1O15075 740 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 HNRNPH2P55795 449 aaKnown RBP16.91■□□□□ 0.3
CAPN13-203ENST00000458085 BCAS4Q8TDM0 211 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 PYROXD1Q8WU10 500 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 TKTL2Q9H0I9 626 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 MARCH5Q9NX47 278 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 NUP205Q92621 2012 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 EXOC1LA0A1B0GW35 172 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 F5H423 210 aaPredicted RBP16.91■□□□□ 0.3
CAPN13-203ENST00000458085 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 CHADO15335 359 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 CHN1P15882 459 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 SLC11A1P49279 550 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 CXCR3P49682 368 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 EFTUD2Q15029 972 aaKnown RBP eCLIP16.91■□□□□ 0.3
CAPN13-203ENST00000458085 DDR2Q16832 855 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 FAM171A1Q5VUB5 890 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 SCD5Q86SK9 330 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 TMEM173Q86WV6 379 aaPredicted RBP16.91■□□□□ 0.3
CAPN13-203ENST00000458085 CRIPAKQ8N1N5 446 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 SCML4Q8N228 414 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 SEPT8Q92599 483 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 WDCPQ9H6R7 721 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 NMUR1Q9HB89 426 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 PPANQ9NQ55 473 aaKnown RBP16.91■□□□□ 0.3
CAPN13-203ENST00000458085 NUDT5Q9UKK9 219 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 ADAM28Q9UKQ2 775 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 OGDHLQ9ULD0 1010 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 CHMP2BQ9UQN3 213 aa16.91■□□□□ 0.3
CAPN13-203ENST00000458085 POC1B-GALNT4F8VUJ3 575 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 COL6A1P12109 1028 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 CCL5P13501 91 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 ERCC2P18074 760 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 YWHAGP61981 247 aaKnown RBP eCLIP16.9■□□□□ 0.3
CAPN13-203ENST00000458085 PDIK1LQ8N165 341 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 TFB1MQ8WVM0 346 aaKnown RBP16.9■□□□□ 0.3
CAPN13-203ENST00000458085 MRRFQ96E11 262 aaKnown RBP16.9■□□□□ 0.3
CAPN13-203ENST00000458085 CEP41Q9BYV8 373 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 PPP1R12CQ9BZL4 782 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 RRN3Q9NYV6 651 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 LGALS13Q9UHV8 139 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 A6NNZ2 444 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 E7EVH7 732 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 CDH16O75309 829 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 GCATO75600 419 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 APRTP07741 180 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 ELK3P41970 407 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 TUBB8Q3ZCM7 444 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 HEATR6Q6AI08 1181 aaKnown RBP16.9■□□□□ 0.3
CAPN13-203ENST00000458085 HTR3CQ8WXA8 447 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 PHACTR1Q9C0D0 580 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 PRDM12Q9H4Q4 367 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 SFMBT1Q9UHJ3 866 aa16.9■□□□□ 0.3
CAPN13-203ENST00000458085 C5orf60A6NFR6 353 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 IGLV3-25P01717 112 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 IVLP07476 585 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 TPI1P60174 286 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 EIF4EBP2Q13542 120 aaPredicted RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 PAFAH1B3Q15102 231 aaKnown RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 TMED2Q15363 201 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 RSPO2Q6UXX9 243 aaPredicted RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 CAND1Q86VP6 1230 aaKnown RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 NPWQ8N729 165 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 ATAD1Q8NBU5 361 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 CCDC77Q9BR77 488 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 STMN4Q9H169 189 aaPredicted RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 EPN3Q9H201 632 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 CNOT10Q9H9A5 744 aaKnown RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 OSER1Q9NX31 292 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 RABGEF1Q9UJ41 708 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 SMAPO00193 183 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 MSI1O43347 362 aaKnown RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 SOAT2O75908 522 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 F9P00740 461 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 MNX1P50219 401 aaPredicted RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 AIF1P55008 147 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 AP1B1Q10567 949 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 MRPL58Q14197 206 aaKnown RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 PRKD1Q15139 912 aaPredicted RBP16.89■□□□□ 0.29
CAPN13-203ENST00000458085 CTXN3Q4LDR2 81 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 C3orf62Q6ZUJ4 267 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 DEFB128Q7Z7B8 93 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 GPR152Q8TDT2 470 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 MAML1Q92585 1016 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 CASP10Q92851 521 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 KLC2Q9H0B6 622 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 HIPK3Q9H422 1215 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 LRFN2Q9ULH4 789 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 TEX264Q9Y6I9 313 aa16.89■□□□□ 0.29
CAPN13-203ENST00000458085 SYN3O14994 580 aa16.88■□□□□ 0.29
CAPN13-203ENST00000458085 CYP2C18P33260 490 aa16.88■□□□□ 0.29
CAPN13-203ENST00000458085 GRIA1P42261 906 aa16.88■□□□□ 0.29
CAPN13-203ENST00000458085 MAGEA6P43360 314 aa16.88■□□□□ 0.29
CAPN13-203ENST00000458085 USP46P62068 366 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms