RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 DPP3Q9NY33 737 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 ZNF212Q9UDV6 495 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 CHRM1P11229 460 aaPredicted RBP20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 ARF4P18085 180 aaPredicted RBP20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 SATB1Q01826 763 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 SULF1Q8IWU6 871 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 OR6B3Q8NGW1 331 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 GBP5Q96PP8 586 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 SPATC1LQ9H0A9 340 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 IFT122Q9HBG6 1241 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 SCN1AP35498 2009 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 CCDC130P13994 396 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 SAT1P21673 171 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 GABRB2P47870 512 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 AP2B1P63010 937 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 SARNPP82979 210 aaKnown RBP20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 PDE1CQ14123 709 aaPredicted RBP20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 OLFML1Q6UWY5 402 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 CHST13Q8NET6 341 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 GBA2Q9HCG7 927 aaPredicted RBP20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 EMCNQ9ULC0 261 aa20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 MRPL42Q9Y6G3 142 aaKnown RBP20.19■□□□□ 0.82
CNEP1R1-203ENST00000458059 KLF11O14901 512 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 NPTXRO95502 500 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 SERPINB6P35237 376 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 RABGGTBP53611 331 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 DSG1Q02413 1049 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 CDC16Q13042 620 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 ITGA9Q13797 1035 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 HIC1Q14526 733 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 Q3C1V9 767 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 BOLA3Q53S33 107 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 DEFB132Q7Z7B7 95 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 SESTD1Q86VW0 696 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 WDR75Q8IWA0 830 aaKnown RBP20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 TRIM42Q8IWZ5 723 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 FAM167AQ96KS9 214 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 FGD4Q96M96 766 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 MMADHCQ9H3L0 296 aaPredicted RBP20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 NME7Q9Y5B8 376 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 E9PBE3 544 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 KLHL41O60662 606 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 LYNP07948 512 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 TXNP10599 105 aaKnown RBP20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 VAV1P15498 845 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 TSHRP16473 764 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 RAP1GDS1P52306 607 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 ACTR3P61158 418 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 BIRC2Q13490 618 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 LBRQ14739 615 aaKnown RBP20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 NLRP7Q8WX94 980 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 KHSRPQ92945 711 aaKnown RBP eCLIP20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 FAM149B1Q96BN6 582 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 C12orf42Q96LP6 360 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 PDZD7Q9H5P4 517 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 PNPLA8Q9NP80 782 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 XPNPEP3Q9NQH7 507 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 AP4E1Q9UPM8 1137 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 APOBEC2Q9Y235 224 aaKnown RBP20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 TNFSF13BQ9Y275 285 aa20.18■□□□□ 0.82
CNEP1R1-203ENST00000458059 A0A088AWK7 358 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 GOLGA8QA0A0J9YX86 632 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 GOLGA8OA6NCC3 632 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 GOLGA8NF8WBI6 632 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 GOLGA8TH3BQL2 631 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 ZNF286BP0CG31 522 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 INSRRP14616 1297 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 CRHR1P34998 444 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 ASPHQ12797 758 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 LBX2Q6XYB7 198 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 MAVSQ7Z434 540 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 HPS6Q86YV9 775 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 PHTF2Q8N3S3 785 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 NME8Q8N427 588 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 CXorf38Q8TB03 319 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 PIWIL2Q8TC59 973 aaKnown RBP20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 ECSITQ9BQ95 431 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 THAP1Q9NVV9 213 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 TMEM216Q9P0N5 145 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 FAM159BA6NKW6 160 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 A8MXQ7 604 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 MAGEC1O60732 1142 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 RNASEH1O60930 286 aaKnown RBP20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 IL18RAPO95256 599 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 PITX1P78337 314 aaPredicted RBP20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 CUL3Q13618 768 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 TEDDM1Q5T9Z0 273 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 NET1Q7Z628 596 aaPredicted RBP20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 CAB39LQ9H9S4 337 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 ZNF180Q9UJW8 692 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 SOX13Q9UN79 622 aa20.17■□□□□ 0.82
CNEP1R1-203ENST00000458059 A0A1B0GVG6 124 aa20.16■□□□□ 0.82
CNEP1R1-203ENST00000458059 MAGEA13PA6NCF6 341 aa20.16■□□□□ 0.82
CNEP1R1-203ENST00000458059 SDR42E2A6NKP2 422 aa20.16■□□□□ 0.82
CNEP1R1-203ENST00000458059 DCXO43602 365 aa20.16■□□□□ 0.82
CNEP1R1-203ENST00000458059 CREB3O43889 395 aa20.16■□□□□ 0.82
CNEP1R1-203ENST00000458059 SNNO75324 88 aaPredicted RBP20.16■□□□□ 0.82
CNEP1R1-203ENST00000458059 SERPINA6P08185 405 aa20.16■□□□□ 0.82
CNEP1R1-203ENST00000458059 FGF3P11487 239 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms