RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 GLUD1P00367 558 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 APOEP02649 317 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 ITGAVP06756 1048 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 CNPP09543 421 aaKnown RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 RARGP13631 454 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 TFE3P19532 575 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 DNAJB2P25686 324 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 HOXA9P31269 272 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 GPR15P49685 360 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 VCPP55072 806 aaKnown RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 ERVK-21P61565 698 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 USP46P62068 366 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 IFRD2Q12894 506 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 SEMA3BQ13214 749 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 XRCC4Q13426 336 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 TRIP4Q15650 581 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 ANKRD20A8PQ5CZ79 823 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 NUGGCQ68CJ6 796 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 AADACL2Q6P093 401 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 LILRA6Q6PI73 481 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 JAMLQ86YT9 394 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 ELMOD1Q8N336 334 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC185Q8N715 623 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 CCDC89Q8N998 374 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 LEMD2Q8NC56 503 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 SLC35B2Q8TB61 432 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 SPPL3Q8TCT6 385 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 EDEM1Q92611 657 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 P3H4Q92791 437 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 RNF34Q969K3 372 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 C1orf74Q96LT6 269 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZNF512Q96ME7 567 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 CSPG4P5Q96PW8 444 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 FERMT1Q9BQL6 677 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 ERP44Q9BS26 406 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 HEMGNQ9BXL5 484 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 BRD8Q9H0E9 1235 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 PLEKHA4Q9H4M7 779 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 NMUR1Q9HB89 426 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 GDF3Q9NR23 364 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 FAM114A2Q9NRY5 505 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 KLHL11Q9NVR0 708 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 MTMR10Q9NXD2 777 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 TRPM5Q9NZQ8 1165 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 MARCH2Q9P0N8 246 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 AMACRQ9UHK6 382 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZMYM5Q9UJ78 669 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 V9GYY5 206 aaPredicted RBP9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 GREB1Q4ZG55 1949 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 CEP290O15078 2479 aa9.24□□□□□ -0.93
CDC42EP3-204ENST00000457889 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TCRBV7S2A1N4TA0A589 114 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 LCHNA4D1U4 455 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZNF840PA6NDX5 716 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 C2orf71A6NGG8 1288 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 HACD1B0YJ81 288 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 NCAM2O15394 837 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TGM5O43548 720 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TLR5O60602 858 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 SEC24AO95486 1093 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 IGLV3-27P01718 113 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 LRG1P02750 347 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 KRT10P13645 584 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 HMGA1P17096 107 aaKnown RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 IL4RP24394 825 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 HOXC13P31276 330 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 STIP1P31948 543 aaKnown RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 SERPINB6P35237 376 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 RABGGTBP53611 331 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TBX4P57082 545 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TPI1P60174 286 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 PITX1P78337 314 aaPredicted RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 CAV1Q03135 178 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 TWF1Q12792 350 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 PTK6Q13882 451 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 NOMO1Q15155 1222 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 OASLQ15646 514 aaKnown RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZC3H12AQ5D1E8 599 aaKnown RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 C10orf120Q5SQS8 335 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 C6orf132Q5T0Z8 1188 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 HECTD3Q5T447 861 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 SDHAF4Q5VUM1 108 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 KAZNQ674X7 775 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 EMBQ6PCB8 327 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 C4orf22Q6V702 233 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 RFX8Q6ZV50 586 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ADAT2Q7Z6V5 191 aaKnown RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 UNC45BQ8IWX7 931 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ZDHHC14Q8IZN3 488 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ATP6V0D2Q8N8Y2 350 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 BBOF1Q8ND07 529 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ACTL9Q8TC94 416 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 POF1BQ8WVV4 589 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 ACSF2Q96CM8 615 aaPredicted RBP9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 SLC39A13Q96H72 371 aa9.23□□□□□ -0.93
CDC42EP3-204ENST00000457889 PKNOX2Q96KN3 472 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms