RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 NFKB1P19838 968 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MAPKAPK2P49137 400 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PPP4CP60510 307 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ST3GAL1Q11201 340 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 SNAPC2Q13487 334 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZMYND11Q15326 602 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 GPR162Q16538 588 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 SPATS1Q496A3 300 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ERFEQ4G0M1 354 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MTX3Q5HYI7 312 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 RNF43Q68DV7 783 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PAGE2Q7Z2X7 111 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 METTL16Q86W50 562 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 DHFR2Q86XF0 187 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 NBPF15Q8N660 670 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MCEEQ96PE7 176 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 EHD4Q9H223 541 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ASB7Q9H672 318 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 SPASTQ9UBP0 616 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PCSK1NQ9UHG2 260 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 TBX20Q9UMR3 447 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ST3GAL5Q9UNP4 418 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 DMTF1Q9Y222 760 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 TBC1D30Q9Y2I9 924 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PCDHGB3Q9Y5G1 929 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MADDQ8WXG6 1647 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CYP26A1O43174 497 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CST8O60676 142 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 GCATO75600 419 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PLEKHA8P1O95397 391 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CYP2D6P10635 497 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CLK3P49761 638 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MPP3Q13368 585 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 DPYSQ14117 519 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 NANOGNBQ7Z5D8 188 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZNF605Q86T29 641 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 UNC5CLQ8IV45 518 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MAN1C1Q9NR34 630 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZNF112Q9UJU3 913 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 RPS6KL1Q9Y6S9 549 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZSCAN5CA6NGD5 496 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PHGDHO43175 533 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 SRGAP2O75044 1071 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CYP1A2P05177 515 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 COMTP21964 271 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 EIF4BP23588 611 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 GNL1P36915 607 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PNLIPRP1P54315 467 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 VBP1P61758 197 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 BROXQ5VW32 411 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ABRAXAS1Q6UWZ7 409 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CCDC149Q6ZUS6 474 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 STRA8Q7Z7C7 330 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 TRIM48Q8IWZ4 208 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 SPICE1Q8N0Z3 855 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 NUP93Q8N1F7 819 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 HPDLQ96IR7 371 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 HOPXQ9BPY8 73 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ELOVL6Q9H5J4 265 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 GPN1Q9HCN4 374 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CCDC59Q9P031 241 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZBTB12Q9Y330 459 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CHADO15335 359 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 OR56A5P0C7T3 313 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CYP11B2P19099 503 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CHRM3P20309 590 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 DYNLL1P63167 89 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZPBP2Q6X784 338 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 FAM120BQ96EK7 910 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 KLHL25Q9H0H3 589 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 TRIT1Q9H3H1 467 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 METTL5Q9NRN9 209 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 HEY2Q9UBP5 337 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CORO1CQ9ULV4 474 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 L1RE1Q9UN81 338 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 AGAP1Q9UPQ3 857 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CCDC195A0A1B0GUA6 201 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 DARSP14868 501 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CPA3P15088 417 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CAPGP40121 348 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 GCLCP48506 637 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 CDC42P60953 191 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 EMC2Q15006 297 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 DOK7Q18PE1 504 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZNF410Q86VK4 478 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 GRAMD1CQ8IYS0 662 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MREGQ8N565 214 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 NKAPQ8N5F7 415 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 TDRD5Q8NAT2 981 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 LENG9Q96B70 501 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 ZDHHC15Q96MV8 337 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 COQ7Q99807 217 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 TMEM79Q9BSE2 394 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 EHD1Q9H4M9 534 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PIH1D3Q9NQM4 214 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 MRTO4Q9UKD2 239 aaKnown RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 KIF20BQ96Q89 1820 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 E9PBE3 544 aa4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 SEC24DO94855 1032 aaPredicted RBP4.12□□□□□ -1.75
PPP1R9A-208ENST00000456331 PROSCO94903 275 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms