RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CAVIN2O95810 425 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 GABRG2P18507 467 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 EEF1GP26641 437 aaKnown RBP18.6■□□□□ 0.57
MSH6-207ENST00000456246 HOXD9P28356 352 aaPredicted RBP18.6■□□□□ 0.57
MSH6-207ENST00000456246 WASP42768 502 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 SNX16P57768 344 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 GEN1Q17RS7 908 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 MAP7D1Q3KQU3 841 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 VWA3BQ502W6 1294 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 GJB7Q6PEY0 223 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 CYP2U1Q7Z449 544 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 SCUBE3Q8IX30 993 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 ABCA7Q8IZY2 2146 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 CLEC4CQ8WTT0 213 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 P2RY11Q96G91 374 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 ACOX2Q99424 681 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 ELOVL2Q9NXB9 296 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 CACNA2D2Q9NY47 1150 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 THAP10Q9P2Z0 257 aaPredicted RBP18.6■□□□□ 0.57
MSH6-207ENST00000456246 PCDHGC3Q9UN70 934 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 INVSQ9Y283 1065 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 TLR6Q9Y2C9 796 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 STON1Q9Y6Q2 735 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 THADAQ6YHU6 1953 aa18.6■□□□□ 0.57
MSH6-207ENST00000456246 TYW5A2RUC4 315 aaKnown RBP18.59■□□□□ 0.57
MSH6-207ENST00000456246 E5RJQ4 531 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 CAPN9O14815 690 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 GLI1P08151 1106 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 BCKDHBP21953 392 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 BPIFB4P59827 614 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 ARID5AQ03989 594 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 PDCLQ13371 301 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 ENPP2Q13822 863 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 SF3A2Q15428 464 aaKnown RBP18.59■□□□□ 0.57
MSH6-207ENST00000456246 DQX1Q8TE96 717 aaKnown RBP18.59■□□□□ 0.57
MSH6-207ENST00000456246 POPDC2Q9HBU9 364 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 CD248Q9HCU0 757 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 CALCOCO1Q9P1Z2 691 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 DNAJC12Q9UKB3 198 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 CEP83Q9Y592 693 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 NUP205Q92621 2012 aa18.59■□□□□ 0.57
MSH6-207ENST00000456246 KCNJ18B7U540 433 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 AP5Z1O43299 807 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 ACSL4O60488 711 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 FYNP06241 537 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 NDUFV2P19404 249 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 DHPSP49366 369 aaPredicted RBP18.58■□□□□ 0.56
MSH6-207ENST00000456246 KCNJ12Q14500 433 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 MIIPQ5JXC2 388 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 AHI1Q8N157 1196 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.58■□□□□ 0.56
MSH6-207ENST00000456246 RLN3Q8WXF3 142 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 CIPCQ9C0C6 399 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 LHX5Q9H2C1 402 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 SIX2Q9NPC8 291 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 ASNSD1Q9NWL6 643 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 DNAH14Q0VDD8 3507 aa18.58■□□□□ 0.56
MSH6-207ENST00000456246 PAPSS1O43252 624 aaPredicted RBP18.57■□□□□ 0.56
MSH6-207ENST00000456246 TSPAN3O60637 253 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 APOEP02649 317 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 HOXD12P35452 270 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 KRT9P35527 623 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 YWHAZP63104 245 aaKnown RBP18.57■□□□□ 0.56
MSH6-207ENST00000456246 CCDC6Q16204 474 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 PIK3R6Q5UE93 754 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 RNF43Q68DV7 783 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 IL31Q6EBC2 164 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 KIAA1211LQ6NV74 962 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 METTL3Q86U44 580 aaKnown RBP18.57■□□□□ 0.56
MSH6-207ENST00000456246 HJURPQ8NCD3 748 aaPredicted RBP18.57■□□□□ 0.56
MSH6-207ENST00000456246 ENOX1Q8TC92 643 aaKnown RBP18.57■□□□□ 0.56
MSH6-207ENST00000456246 SLC39A13Q96H72 371 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 FCRL2Q96LA5 508 aaPredicted RBP18.57■□□□□ 0.56
MSH6-207ENST00000456246 ACP6Q9NPH0 428 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 NAALADL1Q9UQQ1 740 aa18.57■□□□□ 0.56
MSH6-207ENST00000456246 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
MSH6-207ENST00000456246 KHNYNO15037 678 aaKnown RBP18.56■□□□□ 0.56
MSH6-207ENST00000456246 GDF9O60383 454 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 SYNCRIPO60506 623 aaKnown RBP18.56■□□□□ 0.56
MSH6-207ENST00000456246 TPM2P07951 284 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 IL12RB1P42701 662 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 APBA1Q02410 837 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 MTA1Q13330 715 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 ZNF234Q14588 700 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 FAM133BQ5BKY9 247 aaKnown RBP18.56■□□□□ 0.56
MSH6-207ENST00000456246 TCP11X2Q5H9J9 407 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 EFHC1Q5JVL4 640 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 LYSMD4Q5XG99 296 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 RBM43Q6ZSC3 357 aaKnown RBP18.56■□□□□ 0.56
MSH6-207ENST00000456246 TAC4Q86UU9 113 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 CCDC117Q8IWD4 279 aaPredicted RBP18.56■□□□□ 0.56
MSH6-207ENST00000456246 FAM71AQ8IYT1 594 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 PPP1R13BQ96KQ4 1090 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 MRGPRX1Q96LB2 322 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 CYTH4Q9UIA0 394 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 MBD1Q9UIS9 605 aaPredicted RBP18.56■□□□□ 0.56
MSH6-207ENST00000456246 GGA2Q9UJY4 613 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 CLEC4EQ9ULY5 219 aa18.56■□□□□ 0.56
MSH6-207ENST00000456246 NFE2L3Q9Y4A8 694 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms