RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 HES6Q96HZ4 224 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 KREMEN1Q96MU8 473 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 SYT11Q9BT88 431 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 C2orf49Q9BVC5 232 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-218ENST00000456174 TRIM55Q9BYV6 548 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 INO80BQ9C086 356 aaPredicted RBP7.89□□□□□ -1.15
HDAC9-218ENST00000456174 GRIP2Q9C0E4 1043 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 KLC2Q9H0B6 622 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 EHD1Q9H4M9 534 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 RRN3Q9NYV6 651 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 TAS2R1Q9NYW7 299 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 GTF3C4Q9UKN8 822 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 PPM1HQ9ULR3 514 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 NENFQ9UMX5 172 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 LZTS1Q9Y250 596 aa7.89□□□□□ -1.15
HDAC9-218ENST00000456174 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.89□□□□□ -1.15
HDAC9-218ENST00000456174 FAM155AB1AL88 458 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-218ENST00000456174 K7EPI3 171 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 ACKR2O00590 384 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 C4BPAP04003 597 aaKnown RBP7.88□□□□□ -1.15
HDAC9-218ENST00000456174 HOXC6P09630 235 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 TNFAIP3P21580 790 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 FGFR4P22455 802 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 PGM1P36871 562 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 STT3AP46977 705 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 NOP14P78316 857 aaKnown RBP7.88□□□□□ -1.15
HDAC9-218ENST00000456174 ZNF829Q3KNS6 432 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-218ENST00000456174 MMEL1Q495T6 779 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 C6orf163Q5TEZ5 329 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 FBXL19Q6PCT2 694 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 DNAAF5Q86Y56 855 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 ANKMY2Q8IV38 441 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 FAM71AQ8IYT1 594 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.88□□□□□ -1.15
HDAC9-218ENST00000456174 PCYOX1LQ8NBM8 494 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 OLIG1Q8TAK6 271 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 HELQQ8TDG4 1101 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 OLFM1Q99784 485 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 AGPAT1Q99943 283 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 FZD8Q9H461 694 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 ZFYVE28Q9HCC9 887 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 MAN1C1Q9NR34 630 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 FLRT1Q9NZU1 646 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 TMA7Q9Y2S6 64 aaKnown RBP7.88□□□□□ -1.15
HDAC9-218ENST00000456174 PTPRJQ12913 1337 aa7.88□□□□□ -1.15
HDAC9-218ENST00000456174 CASQ2O14958 399 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 OGTO15294 1046 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 DYNC1LI2O43237 492 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 FAM189A1O60320 539 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 ZC3H11AO75152 810 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 CSDE1O75534 798 aaKnown RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 CIB2O75838 187 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 RSL1D1O76021 490 aaKnown RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 ESRRBO95718 433 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 H2AFZP0C0S5 128 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 CYP2B6P20813 491 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 PRKACBP22694 351 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 TNFSF9P41273 254 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 PTGIRP43119 386 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 AQP4P55087 323 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 MBTD1Q05BQ5 628 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 CLUL1Q15846 466 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 CCL14Q16627 93 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 PDK4Q16654 411 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 LONRF1Q17RB8 773 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 ZACNQ401N2 412 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 ZFYVE27Q5T4F4 411 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 TDRD10Q5VZ19 366 aaKnown RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 KYAT3Q6YP21 454 aaKnown RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 RIPOR1Q6ZS17 1223 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 H2AFVQ71UI9 128 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 MTDHQ86UE4 582 aaKnown RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 SIX5Q8N196 739 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 LINC01465Q8N7H1 131 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 ATP6V0D2Q8N8Y2 350 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 LILRB4Q8NHJ6 448 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 TPCN2Q8NHX9 752 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 GABPB2Q8TAK5 448 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 DENND1AQ8TEH3 1009 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 SLC20A1Q8WUM9 679 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 SHC3Q92529 594 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 ELMO3Q96BJ8 720 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 PANX3Q96QZ0 392 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 CGRRF1Q99675 332 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 PSD2Q9BQI7 771 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 PI4K2AQ9BTU6 479 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 MRPL1Q9BYD6 325 aaKnown RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 NFKBIZQ9BYH8 718 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 MINDY3Q9H8M7 445 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 IFT122Q9HBG6 1241 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 SEPT11Q9NVA2 429 aaKnown RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 C6orf203Q9P0P8 240 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-218ENST00000456174 IGSF9Q9P2J2 1179 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 KANSL3Q9P2N6 904 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 GNPTGQ9UJJ9 305 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 AKT3Q9Y243 479 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 SNX24Q9Y343 169 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 IFT52Q9Y366 437 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 PCDHA3Q9Y5H8 950 aa7.87□□□□□ -1.15
HDAC9-218ENST00000456174 CNTNAP2Q9UHC6 1331 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms