RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 NIPAL4Q0D2K0 466 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 CDC16Q13042 620 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 PPP1R26Q5T8A7 1209 aaPredicted RBP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 N4BP2L1Q5TBK1 243 aaPredicted RBP18.25■□□□□ 0.51
PTPN6-204ENST00000456013 C16orf46Q6P387 395 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 TMEM110Q86TL2 294 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 S100A14Q9HCY8 104 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 CITO14578 2027 aa18.25■□□□□ 0.51
PTPN6-204ENST00000456013 HBP1O60381 514 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PLIN3O60664 434 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 ALDOAP04075 364 aaKnown RBP18.24■□□□□ 0.51
PTPN6-204ENST00000456013 MLNP12872 115 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 SLC26A2P50443 739 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 ERFP50548 548 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 RBP5P82980 135 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 SLC25A3Q00325 362 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 EFHC1Q5JVL4 640 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 KCNT2Q6UVM3 1135 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 SLC25A41Q8N5S1 370 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 GSTCDQ8NEC7 633 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PPP2R3CQ969Q6 453 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 FGD4Q96M96 766 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 CCDC28BQ9BUN5 200 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PDZD7Q9H5P4 517 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 FAM96AQ9H5X1 160 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 DCDC2Q9UHG0 476 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 CCNT2O60583 730 aaKnown RBP18.24■□□□□ 0.51
PTPN6-204ENST00000456013 USP1O94782 785 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 SETSIPP0DME0 302 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 ADORA2AP29274 412 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PHKA2P46019 1235 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PDE1BQ01064 536 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 HNRNPDQ14103 355 aaKnown RBP18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PDE1CQ14123 709 aaPredicted RBP18.24■□□□□ 0.51
PTPN6-204ENST00000456013 AMHR2Q16671 573 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 HEATR6Q6AI08 1181 aaKnown RBP18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PACS1Q6VY07 963 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PAXIP1Q6ZW49 1069 aaPredicted RBP18.24■□□□□ 0.51
PTPN6-204ENST00000456013 SESTD1Q86VW0 696 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 TTC30AQ86WT1 665 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 APOBEC3FQ8IUX4 373 aaKnown RBP18.24■□□□□ 0.51
PTPN6-204ENST00000456013 SCUBE3Q8IX30 993 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 MMP19Q99542 508 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 DPP3Q9NY33 737 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 PIM2Q9P1W9 311 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 MORF4L1Q9UBU8 362 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 HESX1Q9UBX0 185 aa18.24■□□□□ 0.51
PTPN6-204ENST00000456013 WDR27A2RRH5 827 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 A6NJR5 290 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 PAPSS1O43252 624 aaPredicted RBP18.23■□□□□ 0.51
PTPN6-204ENST00000456013 CSDE1O75534 798 aaKnown RBP18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SNUPNO95149 360 aaKnown RBP18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SERPINE1P05121 402 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 POU5F1BQ06416 359 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 PCLAFQ15004 111 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 TREML2Q5T2D2 321 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 DPY19L2Q6NUT2 758 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 CCNJLQ8IV13 435 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 UNC5BQ8IZJ1 945 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 CDKL2Q92772 493 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 ATP2A3Q93084 1043 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SPATA33Q96N06 139 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 GBP5Q96PP8 586 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SPATC1LQ9H0A9 340 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SMARCAD1Q9H4L7 1026 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 DHX35Q9H5Z1 703 aaKnown RBP18.23■□□□□ 0.51
PTPN6-204ENST00000456013 XPNPEP3Q9NQH7 507 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 DNAJC28Q9NX36 388 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 GTF2IRD1Q9UHL9 959 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 ARHGAP42A6NI28 874 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SOCS7O14512 581 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 TPP1O14773 563 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SIN3BO75182 1162 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
PTPN6-204ENST00000456013 MYL4P12829 197 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 TFE3P19532 575 aaPredicted RBP18.23■□□□□ 0.51
PTPN6-204ENST00000456013 FDFT1P37268 417 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 PTPN9P43378 593 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 COPAP53621 1224 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 RBBP5Q15291 538 aaKnown RBP18.23■□□□□ 0.51
PTPN6-204ENST00000456013 KYAT1Q16773 422 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 SLC35F5Q8WV83 523 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 ZDHHC7Q9NXF8 308 aa18.23■□□□□ 0.51
PTPN6-204ENST00000456013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.22■□□□□ 0.51
PTPN6-204ENST00000456013 GABBR2O75899 941 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 KCNA4P22459 653 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 GRK2P25098 689 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 NAB1Q13506 487 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 PRKG1Q13976 671 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 INSCQ1MX18 579 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 AP1ARQ63HQ0 302 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 PGM2L1Q6PCE3 622 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 RAPH1Q70E73 1250 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 DHDDSQ86SQ9 333 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 ZDHHC17Q8IUH5 632 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 SHKBP1Q8TBC3 707 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 CPB2Q96IY4 423 aa18.22■□□□□ 0.51
PTPN6-204ENST00000456013 C11orf84Q9BUA3 381 aaPredicted RBP18.22■□□□□ 0.51
PTPN6-204ENST00000456013 MTMR10Q9NXD2 777 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms