RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TPM4P67936 248 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 NOMO3P69849 1222 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 CDR2Q01850 454 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 KDSRQ06136 332 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 SIM2Q14190 667 aaPredicted RBP18.05■□□□□ 0.48
USP39-208ENST00000455732 HSF5Q4G112 596 aaPredicted RBP18.05■□□□□ 0.48
USP39-208ENST00000455732 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 SYPL2Q5VXT5 272 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 GRAMD4Q6IC98 578 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 TAC4Q86UU9 113 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 KIAA2013Q8IYS2 634 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 ZNF397Q8NF99 534 aaPredicted RBP18.05■□□□□ 0.48
USP39-208ENST00000455732 P2RY11Q96G91 374 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 SLC39A13Q96H72 371 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 IRX2Q9BZI1 471 aaPredicted RBP18.05■□□□□ 0.48
USP39-208ENST00000455732 SYNCQ9H7C4 482 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 DNAJC17Q9NVM6 304 aaKnown RBP18.05■□□□□ 0.48
USP39-208ENST00000455732 NCDNQ9UBB6 729 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 MMP17Q9ULZ9 603 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 CACNA1AO00555 2505 aa18.05■□□□□ 0.48
USP39-208ENST00000455732 PLXND1Q9Y4D7 1925 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 TRIM24O15164 1050 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 IRAK2O43187 625 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 CYBBP04839 570 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 TGM1P22735 817 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 SLC6A3Q01959 620 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 EIF4EBP2Q13542 120 aaPredicted RBP18.04■□□□□ 0.48
USP39-208ENST00000455732 TAF5Q15542 800 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 LPAL2Q16609 132 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 ADGRF1Q5T601 910 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 EMC10Q5UCC4 262 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 LAIR1Q6GTX8 287 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 OR6B2Q6IFH4 312 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 PRR23BQ6ZRT6 265 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 NUDT18Q6ZVK8 323 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 LUZP1Q86V48 1076 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 IL17RCQ8NAC3 791 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 MSANTD4Q8NCY6 345 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 KCNV2Q8TDN2 545 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 SLC20A1Q8WUM9 679 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 GAB3Q8WWW8 586 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 FCRL2Q96LA5 508 aaPredicted RBP18.04■□□□□ 0.48
USP39-208ENST00000455732 EBF1Q9UH73 591 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 MYO6Q9UM54 1294 aa18.04■□□□□ 0.48
USP39-208ENST00000455732 NUP205Q92621 2012 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 THADAQ6YHU6 1953 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 DAB1O75553 588 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 APBB3O95704 486 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 CYP1A1P04798 512 aaPredicted RBP18.03■□□□□ 0.48
USP39-208ENST00000455732 CISD3P0C7P0 127 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 TIE1P35590 1138 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 SLC11A2P49281 568 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 FMO1Q01740 532 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 CRY1Q16526 586 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 MPPE1Q53F39 396 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 TRIM72Q6ZMU5 477 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 CCDC33Q8N5R6 958 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 ALLCQ8N6M5 410 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 C18orf8Q96DM3 657 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 NAP1L5Q96NT1 182 aaPredicted RBP18.03■□□□□ 0.48
USP39-208ENST00000455732 HCN2Q9UL51 889 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 RAB23Q9ULC3 237 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 SLC27A6Q9Y2P4 619 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 STARD13Q9Y3M8 1113 aa18.03■□□□□ 0.48
USP39-208ENST00000455732 TBC1D3BA6NDS4 549 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 AXIN1O15169 862 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 ACSL4O60488 711 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 TRUB2O95900 331 aaKnown RBP18.02■□□□□ 0.48
USP39-208ENST00000455732 SERPINC1P01008 464 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 HNRNPLP14866 589 aaKnown RBP eCLIP18.02■□□□□ 0.48
USP39-208ENST00000455732 CHRNB2P17787 502 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 DGKGP49619 791 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 CDK17Q00537 523 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 DNAH14Q0VDD8 3507 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 DCAF6Q58WW2 860 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 FAM133BQ5BKY9 247 aaKnown RBP18.02■□□□□ 0.48
USP39-208ENST00000455732 NAA35Q5VZE5 725 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 RNF43Q68DV7 783 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 TMEM92Q6UXU6 159 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 CACNA2D4Q7Z3S7 1137 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 ERICH1Q86X53 443 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 XYLT1Q86Y38 959 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 DEFB106AQ8N104 65 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 TXNDC5Q8NBS9 432 aaKnown RBP18.02■□□□□ 0.48
USP39-208ENST00000455732 ADAM32Q8TC27 787 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 BHMTQ93088 406 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 SLC2A11Q9BYW1 496 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 GMEB2Q9UKD1 530 aa18.02■□□□□ 0.48
USP39-208ENST00000455732 SGK1O00141 431 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 ADAM23O75077 832 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 RPP40O75818 363 aaKnown RBP18.01■□□□□ 0.47
USP39-208ENST00000455732 KLF8O95600 359 aaPredicted RBP18.01■□□□□ 0.47
USP39-208ENST00000455732 RETP07949 1114 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 CCDC172P0C7W6 258 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 HOXD9P28356 352 aaPredicted RBP18.01■□□□□ 0.47
USP39-208ENST00000455732 PITX1P78337 314 aaPredicted RBP18.01■□□□□ 0.47
USP39-208ENST00000455732 NR1I3Q14994 352 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 C10orf76Q5T2E6 689 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 MPP7Q5T2T1 576 aa18.01■□□□□ 0.47
USP39-208ENST00000455732 CEP68Q76N32 757 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms