RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 SLC8A1P32418 973 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 SERPINB9P50453 376 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 TAF1CQ15572 869 aaPredicted RBP15.55■□□□□ 0.08
LDLR-202ENST00000455727 STEAP4Q687X5 459 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 GSTCDQ8NEC7 633 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 SOCS4Q8WXH5 440 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 SENP8Q96LD8 212 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 FAM111AQ96PZ2 611 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 C9IYK1 514 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 M0QYT0 321 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 M0QZ92 97 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 RFPL1O75677 317 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 ALDH1A2O94788 518 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 CNTFP26441 200 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 NDUFV1P49821 464 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 GJA9P57773 515 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 DEUP1Q05D60 604 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 NBPF20Q3BBV1 942 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 MDH1BQ5I0G3 518 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 KIAA0319Q5VV43 1072 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 LRRC8BQ6P9F7 803 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 CCNJLQ8IV13 435 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 PTPRN2Q92932 1015 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 NTAN1Q96AB6 310 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 THOC1Q96FV9 657 aaKnown RBP15.55■□□□□ 0.08
LDLR-202ENST00000455727 SRPK1Q96SB4 655 aaKnown RBP15.55■□□□□ 0.08
LDLR-202ENST00000455727 MED10Q9BTT4 135 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 TSSK1BQ9BXA7 367 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 IQCGQ9H095 443 aaKnown RBP15.55■□□□□ 0.08
LDLR-202ENST00000455727 C12orf65Q9H3J6 166 aaKnown RBP15.55■□□□□ 0.08
LDLR-202ENST00000455727 NOD2Q9HC29 1040 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 DDX43Q9NXZ2 648 aaKnown RBP15.55■□□□□ 0.08
LDLR-202ENST00000455727 PLLPQ9Y342 182 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 MFHAS1Q9Y4C4 1052 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 RAD54BQ9Y620 910 aa15.55■□□□□ 0.08
LDLR-202ENST00000455727 SCN10AQ9Y5Y9 1956 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 MFSD11O43934 449 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 DUSP11O75319 330 aaKnown RBP15.54■□□□□ 0.08
LDLR-202ENST00000455727 AKR1A1P14550 325 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 TKTL1P51854 596 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 PITX1P78337 314 aaPredicted RBP15.54■□□□□ 0.08
LDLR-202ENST00000455727 SCAPQ12770 1279 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 DPYSQ14117 519 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 SYPL2Q5VXT5 272 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 CST9Q5W186 159 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 TIFABQ6ZNK6 161 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 MPP5Q8N3R9 675 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 COLGALT1Q8NBJ5 622 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 INPP5DQ92835 1189 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 P2RY11Q96G91 374 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 OXNAD1Q96HP4 312 aaPredicted RBP15.54■□□□□ 0.08
LDLR-202ENST00000455727 LGMNQ99538 433 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 TRIM55Q9BYV6 548 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 CD248Q9HCU0 757 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 NPHS2Q9NP85 383 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 CRTAC1Q9NQ79 661 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 CNGB3Q9NQW8 809 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 FAM105AQ9NUU6 356 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 TRPV2Q9Y5S1 764 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 SDR42E2A6NKP2 422 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 PPP1R12AO14974 1030 aaPredicted RBP15.54■□□□□ 0.08
LDLR-202ENST00000455727 THP07101 528 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 KRT16P08779 473 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 ADRA1BP35368 520 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 SERPINB4P48594 390 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 MAP3K7CLP57077 242 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 PARP6Q2NL67 630 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 DENND5BQ6ZUT9 1274 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 NLRP9Q7RTR0 991 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 TRIM42Q8IWZ5 723 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 TTC17Q96AE7 1141 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 STAMBPL1Q96FJ0 436 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 PGAP3Q96FM1 320 aaPredicted RBP15.54■□□□□ 0.08
LDLR-202ENST00000455727 TMEM237Q96Q45 408 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 RAB3IPQ96QF0 476 aaPredicted RBP15.54■□□□□ 0.08
LDLR-202ENST00000455727 NAT9Q9BTE0 207 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 LRMDAQ9H2I8 198 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 SAR1AQ9NR31 198 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 RRN3Q9NYV6 651 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 ST3GAL5Q9UNP4 418 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 CDY2AQ9Y6F7 541 aa15.54■□□□□ 0.08
LDLR-202ENST00000455727 RNF103O00237 685 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 FYNP06241 537 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 CSH1P0DML2 217 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 CSH2P0DML3 217 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 GRIA1P42261 906 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 HCAR3P49019 387 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 DAOAP59103 153 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 PLEKHG4Q58EX7 1191 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 RAB41Q5JT25 222 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 TRMT10BQ6PF06 316 aaKnown RBP15.53■□□□□ 0.08
LDLR-202ENST00000455727 RSPH3Q86UC2 560 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 CCDC33Q8N5R6 958 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 SYT15Q9BQS2 421 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 MTG1Q9BT17 334 aaPredicted RBP15.53■□□□□ 0.08
LDLR-202ENST00000455727 KRT82Q9NSB4 513 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 PIGVQ9NUD9 493 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 PTCH2Q9Y6C5 1203 aa15.53■□□□□ 0.08
LDLR-202ENST00000455727 EEF2KO00418 725 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms