RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 PIGZQ86VD9 579 aa19.56■□□□□ 0.72
MSH6-206ENST00000455383 FOXD4L4Q8WXT5 416 aaPredicted RBP19.56■□□□□ 0.72
MSH6-206ENST00000455383 CDC6Q99741 560 aa19.56■□□□□ 0.72
MSH6-206ENST00000455383 DNAI2Q9GZS0 605 aa19.56■□□□□ 0.72
MSH6-206ENST00000455383 OSGEPQ9NPF4 335 aa19.56■□□□□ 0.72
MSH6-206ENST00000455383 STRIP2Q9ULQ0 834 aa19.56■□□□□ 0.72
MSH6-206ENST00000455383 SLCO1B1Q9Y6L6 691 aa19.56■□□□□ 0.72
MSH6-206ENST00000455383 SLC12A8A0AV02 714 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 FLRT2O43155 660 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 KIF20AO95235 890 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 EPHX1P07099 455 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 YWHAGP61981 247 aaKnown RBP eCLIP19.55■□□□□ 0.72
MSH6-206ENST00000455383 PDE4CQ08493 712 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 COL28A1Q2UY09 1125 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 ARHGAP17Q68EM7 881 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 PM20D1Q6GTS8 502 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 SERPINA13PQ6UXR4 307 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 BHLHA9Q7RTU4 235 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 SLC4A11Q8NBS3 891 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 MDM1Q8TC05 714 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 DDI1Q8WTU0 396 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 PLD4Q96BZ4 506 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 HEXIM2Q96MH2 286 aaKnown RBP19.55■□□□□ 0.72
MSH6-206ENST00000455383 CIPCQ9C0C6 399 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 TMEM245Q9H330 911 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 TMEM8AQ9HCN3 771 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 STOML2Q9UJZ1 356 aa19.55■□□□□ 0.72
MSH6-206ENST00000455383 CELSR3Q9NYQ7 3312 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 A0A1B0GVT2 93 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 ATXN1LP0C7T5 689 aaKnown RBP19.54■□□□□ 0.72
MSH6-206ENST00000455383 NR2F2P24468 414 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 HOXD9P28356 352 aaPredicted RBP19.54■□□□□ 0.72
MSH6-206ENST00000455383 RAD23BP54727 409 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 ZNF394Q53GI3 561 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 KIAA0907Q7Z7F0 614 aaPredicted RBP19.54■□□□□ 0.72
MSH6-206ENST00000455383 TTC39CQ8N584 583 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 SEMA4DQ92854 862 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 C6orf106Q9H6K1 298 aaPredicted RBP19.54■□□□□ 0.72
MSH6-206ENST00000455383 USP25Q9UHP3 1055 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 CFAP45Q9UL16 551 aa19.54■□□□□ 0.72
MSH6-206ENST00000455383 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.54■□□□□ 0.72
MSH6-206ENST00000455383 MUC22E2RYF6 1773 aaPredicted RBP19.54■□□□□ 0.72
MSH6-206ENST00000455383 APC2O95996 2303 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 RHOBTB3O94955 611 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 HLA-EP13747 358 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 HLA-FP30511 346 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 GTF2H1P32780 548 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 ACSL1P33121 698 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 PSMC2P35998 433 aaKnown RBP19.53■□□□□ 0.72
MSH6-206ENST00000455383 CSNK1EP49674 416 aaKnown RBP19.53■□□□□ 0.72
MSH6-206ENST00000455383 AFF3P51826 1226 aaKnown RBP19.53■□□□□ 0.72
MSH6-206ENST00000455383 KIF19Q2TAC6 998 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 MPPE1Q53F39 396 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 RSRC2Q7L4I2 434 aaKnown RBP19.53■□□□□ 0.72
MSH6-206ENST00000455383 FAM124AQ86V42 546 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 CACUL1Q86Y37 369 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 FAM186BQ8IYM0 893 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.53■□□□□ 0.72
MSH6-206ENST00000455383 ANKRD52Q8NB46 1076 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 CCDC150Q8NCX0 1101 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 RHBDD1Q8TEB9 315 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 SNX21Q969T3 373 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 TMEM176AQ96HP8 235 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 LHX5Q9H2C1 402 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 SCUBE2Q9NQ36 999 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 CISHQ9NSE2 258 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 HPSEQ9Y251 543 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 BTBD3Q9Y2F9 522 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 ACACAQ13085 2346 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 LOC400499M0QZD8 3231 aa19.53■□□□□ 0.72
MSH6-206ENST00000455383 KRT13P13646 458 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 PFKFB1P16118 471 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 CMA1P23946 247 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 TKTL1P51854 596 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 ZNF445P59923 1031 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 DNM1Q05193 864 aaKnown RBP19.52■□□□□ 0.72
MSH6-206ENST00000455383 CAMK2BQ13554 666 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 KRT39Q6A163 491 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 ADIPOR2Q86V24 386 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 WFIKKN2Q8TEU8 576 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 ARID3AQ99856 593 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 FBRSQ9HAH7 460 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 RAXQ9Y2V3 346 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 HBS1LQ9Y450 684 aaKnown RBP19.52■□□□□ 0.72
MSH6-206ENST00000455383 SNX11Q9Y5W9 270 aa19.52■□□□□ 0.72
MSH6-206ENST00000455383 NUMA1Q14980 2115 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 A0A1B0GVL5 298 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 PCDHGA12O60330 932 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 TSPAN3O60637 253 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 ZBED1O96006 694 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 GRIA4P48058 902 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 ARID5AQ03989 594 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 ZBTB16Q05516 673 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 SUZ12Q15022 739 aaKnown RBP19.51■□□□□ 0.71
MSH6-206ENST00000455383 PTPRNQ16849 979 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 ZCWPW2Q504Y3 356 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 FMNL3Q8IVF7 1028 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 ORAI3Q9BRQ5 295 aa19.51■□□□□ 0.71
MSH6-206ENST00000455383 ULBP1Q9BZM6 244 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms