RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 HNRNPLLQ8WVV9 542 aaKnown RBP14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 UBL7Q96S82 380 aaPredicted RBP14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 NIF3L1Q9GZT8 377 aa14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 LHX5Q9H2C1 402 aa14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 SGK2Q9HBY8 427 aa14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 OLA1Q9NTK5 396 aaKnown RBP14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 FAM13BQ9NYF5 915 aa14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 MARCH2Q9P0N8 246 aa14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 AGO1Q9UL18 857 aaKnown RBP14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 TPX2Q9ULW0 747 aaKnown RBP14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 SCML1Q9UN30 329 aa14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 PLA2G4CQ9UP65 541 aa14.97□□□□□ -0.01
LYSMD3-202ENST00000453259 TRABD2BA6NFA1 517 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 MDM4O15151 490 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 POLR2DO15514 142 aaKnown RBP14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 HLA-DRAP01903 254 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 MYL1P05976 194 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 C1SP09871 688 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 PRKCHP24723 683 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 CD27P26842 260 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 CSNK1EP49674 416 aaKnown RBP14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 BCAT1P54687 386 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 KIF19Q2TAC6 998 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 RSRC2Q7L4I2 434 aaKnown RBP14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 LSM14AQ8ND56 463 aaKnown RBP14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 DDI1Q8WTU0 396 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 SKA1Q96BD8 255 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 NXPE2Q96DL1 559 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 LRIG1Q96JA1 1093 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 BTBD1Q9H0C5 482 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 TMEM245Q9H330 911 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 TM9SF3Q9HD45 589 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 RASAL2Q9UJF2 1139 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 STOML2Q9UJZ1 356 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 ANKRD6Q9Y2G4 727 aa14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 COL5A1P20908 1838 aaPredicted RBP14.96□□□□□ -0.01
LYSMD3-202ENST00000453259 SMG1Q96Q15 3661 aaKnown RBP14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 YKT6O15498 198 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 TSPAN3O60637 253 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 SEMA4FO95754 770 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 NR3C1P04150 777 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 SLFN14P0C7P3 912 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 HLA-EP13747 358 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 HNF1BP35680 557 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 HARS2P49590 506 aaKnown RBP14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 DLG4P78352 724 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 EFEMP1Q12805 493 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 NFIL3Q16649 462 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 RAB41Q5JT25 222 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 USP30Q70CQ3 517 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 INTS8Q75QN2 995 aaKnown RBP14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 DENND1CQ8IV53 801 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 CEP57L1Q8IYX8 460 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 AHI1Q8N157 1196 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 SNX19Q92543 992 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 JAKMIP2Q96AA8 810 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 ERLEC1Q96DZ1 483 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 P2RY11Q96G91 374 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 TWNKQ96RR1 684 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 KCTD10Q9H3F6 313 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 EXOC1Q9NV70 894 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 NUDT5Q9UKK9 219 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 HBS1LQ9Y450 684 aaKnown RBP14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 SNX11Q9Y5W9 270 aa14.95□□□□□ -0.02
LYSMD3-202ENST00000453259 URB1O60287 2271 aaKnown RBP14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 DNTTP04053 509 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 ATP5BP06576 529 aaKnown RBP14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 CTSKP43235 329 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 ABCG1P45844 678 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 RACK1P63244 317 aaKnown RBP14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 CYP4F3Q08477 520 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 TRIP4Q15650 581 aaPredicted RBP14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 MPP7Q5T2T1 576 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 ATL3Q6DD88 541 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 BIRC7Q96CA5 298 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 ACE2Q9BYF1 805 aaPredicted RBP14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 BLZF1Q9H2G9 400 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 C6orf106Q9H6K1 298 aaPredicted RBP14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 FTSJ1Q9UET6 329 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 TRAF3IP3Q9Y228 551 aa14.94□□□□□ -0.02
LYSMD3-202ENST00000453259 VILLO15195 856 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 CALUO43852 315 aaPredicted RBP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 DLDP09622 509 aaKnown RBP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 HOXD9P28356 352 aaPredicted RBP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 GTF2H1P32780 548 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 ACSL1P33121 698 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 VAMP7P51809 220 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 YWHAGP61981 247 aaKnown RBP eCLIP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 STK4Q13043 487 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 CUL4BQ13620 913 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 FNDC3BQ53EP0 1204 aaKnown RBP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 PPP1R26Q5T8A7 1209 aaPredicted RBP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 TMEM215Q68D42 235 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 PM20D1Q6GTS8 502 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 SPOPLQ6IQ16 392 aa14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 ADAT2Q7Z6V5 191 aaKnown RBP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 KIAA0907Q7Z7F0 614 aaPredicted RBP14.93□□□□□ -0.02
LYSMD3-202ENST00000453259 KIAA0895Q8NCT3 520 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms