RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PSMD14O00487 310 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 POLR3GO15318 223 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 FOXP2O15409 715 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PRPF4O43172 522 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 MTRF1O75570 445 aaKnown RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 RASSF9O75901 435 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PCDH8O95206 1070 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRIM16O95361 564 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 TSPAN15O95858 294 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PAHP00439 452 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PFKMP08237 780 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 INHBAP08476 426 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CTAGE8P0CG41 777 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 GHRP10912 638 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 RARGP13631 454 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PRG2P13727 222 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 IL1R1P14778 569 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CD9P21926 228 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 IL1R2P27930 398 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ADSSP30520 456 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 BSGP35613 385 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CPT1AP50416 773 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF81P51508 661 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SOX8P57073 446 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ACTR1AP61163 376 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ARF5P84085 180 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ITGA7Q13683 1181 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 MXD4Q14582 209 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 INAQ16352 499 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 TYSND1Q2T9J0 566 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 RAB41Q5JT25 222 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 TTC38Q5R3I4 469 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 MBLAC2Q68D91 279 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 TMEM154Q6P9G4 183 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 C15orf52Q6ZUT6 534 aaKnown RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CTAGE6Q86UF2 777 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLCO6A1Q86UG4 719 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM160B2Q86V87 743 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CPNE8Q86YQ8 564 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 LYSMD2Q8IV50 215 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 LINC00346Q8IVM7 164 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CTAGE4Q8IX94 777 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 YAF2Q8IY57 180 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ADGRF2Q8IZF7 708 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SIX6OS1Q8N1H7 587 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 DCLK2Q8N568 766 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 NAT16Q8N8M0 369 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 RTL3Q8N8U3 475 aaKnown RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 POC5Q8NA72 575 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PCSK9Q8NBP7 692 aaKnown RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 GLB1L3Q8NCI6 653 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 OR6C4Q8NGE1 309 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SH3RF2Q8TEC5 729 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 HASPINQ8TF76 798 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CPT1BQ92523 772 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PRCCQ92733 491 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC22A18Q96BI1 424 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 NLRP4Q96MN2 994 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF396Q96N95 335 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 LENG8Q96PV6 779 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 FAM111AQ96PZ2 611 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PKP4Q99569 1192 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC39A3Q9BRY0 314 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 TACO1Q9BSH4 297 aaKnown RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCDC94Q9BW85 323 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PACSIN1Q9BY11 444 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC5A7Q9GZV3 580 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 HSD3B7Q9H2F3 369 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 KAT14Q9H8E8 782 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SMURF2Q9HAU4 748 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 TM9SF3Q9HD45 589 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PCDHB16Q9NRJ7 776 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC35D1Q9NTN3 355 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 RBM12Q9NTZ6 932 aaKnown RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 GIMAP4Q9NUV9 329 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 EXOC1Q9NV70 894 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 HMG20BQ9P0W2 317 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF70Q9UC06 446 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CLIP2Q9UDT6 1046 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 KCND3Q9UK17 655 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 DSEQ9UL01 958 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 LIPT1Q9Y234 373 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 CHKBQ9Y259 395 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 PAXBP1Q9Y5B6 917 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 IGSF1Q8N6C5 1336 aa4.66□□□□□ -1.66
HMGB3P21-201ENST00000452483 A0A087WZ62 844 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZSCAN5CA6NGD5 496 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 LRRIQ4A6NIV6 560 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 WTIPA6NIX2 430 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 LIPT2A6NK58 231 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 HNRNPCL2B2RXH8 293 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 H7BY64 318 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 DNM1LO00429 736 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PEX12O00623 359 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 CTAGE5O15320 804 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MAGEB3O15480 346 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PPP6R2O75170 966 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PSMD10O75832 226 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MATN4O95460 622 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 AHSGP02765 367 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms