RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PEAR1Q5VY43 1037 aaPredicted RBP13□□□□□ -0.33
CPSF4-208ENST00000452047 RNF43Q68DV7 783 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 IL31Q6EBC2 164 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 STK32AQ8WU08 396 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 ZNF606Q8WXB4 792 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
CPSF4-208ENST00000452047 ERLEC1Q96DZ1 483 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 MIS12Q9H081 205 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 SLC6A17Q9H1V8 727 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 CD93Q9NPY3 652 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 ELOVL2Q9NXB9 296 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 APEX2Q9UBZ4 518 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 KHNYNO15037 678 aaKnown RBP12.99□□□□□ -0.33
CPSF4-208ENST00000452047 MAP3K13O43283 966 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 TSPAN3O60637 253 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 ZNF217O75362 1048 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 LETM1O95202 739 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-208ENST00000452047 PON1P27169 355 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 GNA15P30679 374 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 NNTQ13423 1086 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 ZNF234Q14588 700 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 EXOC3L4Q17RC7 722 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 FUT11Q495W5 492 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 NUGGCQ68CJ6 796 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 SLC36A4Q6YBV0 504 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 GBP6Q6ZN66 633 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 ARMCX6Q7L4S7 300 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 KIAA0907Q7Z7F0 614 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-208ENST00000452047 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPSF4-208ENST00000452047 DQX1Q8TE96 717 aaKnown RBP12.99□□□□□ -0.33
CPSF4-208ENST00000452047 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 SHC3Q92529 594 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 PIGKQ92643 395 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 GOLGA1Q92805 767 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 FAM81BQ96LP2 452 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 THAP9Q9H5L6 903 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 SIX2Q9NPC8 291 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 ST7Q9NRC1 585 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 TMEM74BQ9NUR3 256 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 EVLQ9UI08 416 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-208ENST00000452047 PCDH15Q96QU1 1955 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 CHD8Q9HCK8 2581 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 SPEGQ15772 3267 aa12.99□□□□□ -0.33
CPSF4-208ENST00000452047 ASPMQ8IZT6 3477 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 FRYQ5TBA9 3013 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 WDFY3Q8IZQ1 3526 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 ATXN2Q99700 1313 aaKnown RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 E5RJQ4 531 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 SART1O43290 800 aaKnown RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 AP5Z1O43299 807 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 THAP12O43422 761 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 MED7O43513 233 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 ADRB1P08588 477 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 NCAM1P13591 858 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 ITPKAP23677 461 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 PRKCHP24723 683 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 SLC6A4P31645 630 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 HOXD12P35452 270 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 ACADSBP45954 432 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 TBX4P57082 545 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 IRX4P78413 519 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 STARD3Q14849 445 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 ARHGAP44Q17R89 818 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 MPP7Q5T2T1 576 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 PIK3R6Q5UE93 754 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 LYSMD4Q5XG99 296 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 NADSYN1Q6IA69 706 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 RFWD3Q6PCD5 774 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 CLEC17AQ6ZS10 378 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 BEND5Q7L4P6 421 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 CREBRFQ8IUR6 639 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 WFDC5Q8TCV5 224 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 SORCS1Q8WY21 1168 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 AZIN2Q96A70 460 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 FAM149B1Q96BN6 582 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 TMA16Q96EY4 203 aaKnown RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 SLC39A13Q96H72 371 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 FCRL2Q96LA5 508 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 PRICKLE1Q96MT3 831 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 LSM14BQ9BX40 385 aaKnown RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 CIPCQ9C0C6 399 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 MKRN2Q9H000 416 aaKnown RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 AJAP1Q9UKB5 411 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-208ENST00000452047 PILRBQ9UKJ0 227 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 CYP8B1Q9UNU6 501 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
CPSF4-208ENST00000452047 ACACBO00763 2458 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 C4orf47A7E2U8 309 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 CDX4O14627 284 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms