RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 CEP76Q8TAP6 659 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 NDRG1Q92597 394 aaKnown RBP16.7■□□□□ 0.26
SGCE-208ENST00000450385 EDEM1Q92611 657 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 NOX5Q96PH1 765 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 CD248Q9HCU0 757 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 PLK2Q9NYY3 685 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 SFMBT1Q9UHJ3 866 aa16.7■□□□□ 0.26
SGCE-208ENST00000450385 EVLQ9UI08 416 aaPredicted RBP16.7■□□□□ 0.26
SGCE-208ENST00000450385 TYW5A2RUC4 315 aaKnown RBP16.69■□□□□ 0.26
SGCE-208ENST00000450385 KHNYNO15037 678 aaKnown RBP16.69■□□□□ 0.26
SGCE-208ENST00000450385 TRIM24O15164 1050 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 LETM1O95202 739 aaPredicted RBP16.69■□□□□ 0.26
SGCE-208ENST00000450385 NCAM1P13591 858 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 GABRG2P18507 467 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 SLC9A1P19634 815 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 RGS7P49802 495 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 CYP2U1Q7Z449 544 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 KIAA0907Q7Z7F0 614 aaPredicted RBP16.69■□□□□ 0.26
SGCE-208ENST00000450385 SYT12Q8IV01 421 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 SCUBE3Q8IX30 993 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.69■□□□□ 0.26
SGCE-208ENST00000450385 GBP4Q96PP9 640 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 NDST4Q9H3R1 872 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 FBRSQ9HAH7 460 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 POPDC2Q9HBU9 364 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 ST7Q9NRC1 585 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 ASNSD1Q9NWL6 643 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 PLA2G4CQ9UP65 541 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 CKAP5Q14008 2032 aa16.69■□□□□ 0.26
SGCE-208ENST00000450385 THAP12O43422 761 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 ACSL4O60488 711 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 SLC2A3P11169 496 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 EEF1GP26641 437 aaKnown RBP16.68■□□□□ 0.26
SGCE-208ENST00000450385 HOXD9P28356 352 aaPredicted RBP16.68■□□□□ 0.26
SGCE-208ENST00000450385 OXTRP30559 389 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 TBX4P57082 545 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 YWHAZP63104 245 aaKnown RBP16.68■□□□□ 0.26
SGCE-208ENST00000450385 ARID5AQ03989 594 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 LMAN2Q12907 356 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 VWA3BQ502W6 1294 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 PIK3R6Q5UE93 754 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 PEAR1Q5VY43 1037 aaPredicted RBP16.68■□□□□ 0.26
SGCE-208ENST00000450385 BHMTQ93088 406 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 TUBGCP2Q9BSJ2 902 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 SLC12A6Q9UHW9 1150 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 DAAM1Q9Y4D1 1078 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 CEP83Q9Y592 693 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 STON1Q9Y6Q2 735 aa16.68■□□□□ 0.26
SGCE-208ENST00000450385 CNOT1A5YKK6 2376 aaKnown RBP16.68■□□□□ 0.26
SGCE-208ENST00000450385 TNRC6BQ9UPQ9 1833 aaKnown RBP16.68■□□□□ 0.26
SGCE-208ENST00000450385 ANTXRLA6NF34 631 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 CAPN9O14815 690 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 TM4SF5O14894 197 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 SYNCRIPO60506 623 aaKnown RBP16.67■□□□□ 0.26
SGCE-208ENST00000450385 ATP5BP06576 529 aaKnown RBP16.67■□□□□ 0.26
SGCE-208ENST00000450385 GEN1Q17RS7 908 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 EFHC1Q5JVL4 640 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 STPG1Q5TH74 334 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 ZDHHC17Q8IUH5 632 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 CCDC117Q8IWD4 279 aaPredicted RBP16.67■□□□□ 0.26
SGCE-208ENST00000450385 AHI1Q8N157 1196 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 FOXJ1Q92949 421 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 FAM149B1Q96BN6 582 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 SLC39A13Q96H72 371 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 MRGPRX1Q96LB2 322 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 MIS12Q9H081 205 aa16.67■□□□□ 0.26
SGCE-208ENST00000450385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.67■□□□□ 0.26
SGCE-208ENST00000450385 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 FYNP06241 537 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 NDUFV2P19404 249 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 KRT9P35527 623 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 DHPSP49366 369 aaPredicted RBP16.66■□□□□ 0.26
SGCE-208ENST00000450385 SF3A2Q15428 464 aaKnown RBP16.66■□□□□ 0.26
SGCE-208ENST00000450385 ARHGAP44Q17R89 818 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 ACBD5Q5T8D3 534 aaPredicted RBP16.66■□□□□ 0.26
SGCE-208ENST00000450385 DAB2IPQ5VWQ8 1189 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 DENND1BQ6P3S1 775 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 KDM1BQ8NB78 822 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 FIBINQ8TAL6 211 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 ENOX1Q8TC92 643 aaKnown RBP16.66■□□□□ 0.26
SGCE-208ENST00000450385 BTN2A3PQ96KV6 586 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 ACOX2Q99424 681 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 NUSAP1Q9BXS6 441 aaKnown RBP16.66■□□□□ 0.26
SGCE-208ENST00000450385 PRDM16Q9HAZ2 1276 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 ITM2CQ9NQX7 267 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 LMBRD1Q9NUN5 540 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 CACNA2D2Q9NY47 1150 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 RRN3Q9NYV6 651 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 CALCOCO1Q9P1Z2 691 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 SUN2Q9UH99 717 aa16.66■□□□□ 0.26
SGCE-208ENST00000450385 MBD1Q9UIS9 605 aaPredicted RBP16.66■□□□□ 0.26
SGCE-208ENST00000450385 BECN2A8MW95 431 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 PAPSS1O43252 624 aaPredicted RBP16.65■□□□□ 0.26
SGCE-208ENST00000450385 GDF9O60383 454 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 IGLV3-19P01714 112 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 APOEP02649 317 aa16.65■□□□□ 0.26
SGCE-208ENST00000450385 BCKDHBP21953 392 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms