RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 C12orf65Q9H3J6 166 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 GIN1Q9NXP7 522 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 FAM237BA0A1B0GVD1 139 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 FOXD2O60548 495 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 SOX10P56693 466 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 C21orf59P57076 290 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 FAM91A1Q658Y4 838 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 LZTR1Q8N653 840 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 DCUN1D1Q96GG9 259 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 CENPOQ9BU64 300 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 KIFC3Q9BVG8 833 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 VPS11Q9H270 941 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 ARHGAP28Q9P2N2 729 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 SOBPA7XYQ1 873 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 TGDSO95455 350 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 ZBTB11O95625 1053 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 SUPT20HL2P0C7V6 817 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 NSUN2Q08J23 767 aaKnown RBP eCLIP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 HIF1AQ16665 826 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 GALNT4Q8N4A0 578 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 RSAD2Q8WXG1 361 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 TMIGD2Q96BF3 282 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 CEP44Q9C0F1 390 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 CYP26B1Q9NR63 512 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 KDM1AO60341 852 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 CRTAMO95727 393 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 MYCLP1P12525 358 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 ALDH1A3P47895 512 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 ARSEP51690 589 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 EPHB1P54762 984 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 PRKG1Q13976 671 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 ATG16L1Q676U5 607 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 SLFN12LQ6IEE8 588 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 PRPF39Q86UA1 669 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 ZNF276Q8N554 614 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 TCP10LQ8TDR4 215 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 EME1Q96AY2 570 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 PLEKHA8Q96JA3 519 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 FRMD8Q9BZ67 464 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 PCDH9Q9HC56 1237 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 TTLL3Q9Y4R7 772 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 AP4B1Q9Y6B7 739 aa13.88□□□□□ -0.19
SYNGAP1-204ENST00000449372 ATF7P17544 494 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 PRKCEQ02156 737 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 GPS1Q13098 491 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 CCDC124Q96CT7 223 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 PCYT2Q99447 389 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 FAM96AQ9H5X1 160 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 DGAT1O75907 488 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 BAIAP3O94812 1187 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 ENDOUP21128 410 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 RRM1P23921 792 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 HMOX2P30519 316 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 AP3M2P53677 418 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 CCNIQ14094 377 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 ZNF829Q3KNS6 432 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 SPOPLQ6IQ16 392 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 ATG4AQ8WYN0 398 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 CEP170P1Q96L14 293 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 HEMGNQ9BXL5 484 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 MEI4A8MW99 385 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 SOCS7O14512 581 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 CASQ2O14958 399 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 HNRNPDLO14979 420 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 TLR3O15455 904 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 TNNI1P19237 187 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 HP1BP3Q5SSJ5 553 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 HAUS8Q9BT25 410 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 MRPL46Q9H2W6 279 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 GID8Q9NWU2 228 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 CHORDC1Q9UHD1 332 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 RAB26Q9ULW5 256 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 KCNH4Q9UQ05 1017 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
SYNGAP1-204ENST00000449372 SGK1O00141 431 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 INHBAP08476 426 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 RCVRNP35243 200 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 GSSP48637 474 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 PIGHQ14442 188 aaPredicted RBP13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 VASH1Q7L8A9 365 aaPredicted RBP13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 CBWD2Q8IUF1 395 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 FEZF2Q8TBJ5 459 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 ACTRT2Q8TDY3 377 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 DCUN1D5Q9BTE7 237 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 SOX13Q9UN79 622 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 ALOX15BO15296 676 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 LIG4P49917 911 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 PSMC1P62191 440 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 CLDN10P78369 228 aa13.86□□□□□ -0.19
SYNGAP1-204ENST00000449372 PDIA2Q13087 525 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms