RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 BNIPLQ7Z465 357 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 PSTKQ8IV42 348 aaKnown RBP16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 OTUD6BQ8N6M0 293 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 SLC7A14Q8TBB6 771 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 CCDC110Q8TBZ0 833 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 EDEM1Q92611 657 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 FTHL17Q9BXU8 183 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 KLC2Q9H0B6 622 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 RNF208Q9H0X6 261 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 CSNK1G1Q9HCP0 422 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 PIGVQ9NUD9 493 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 TTC3P53804 2025 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 FAM47DPA6NHR8 397 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 CAPN9O14815 690 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 AVILO75366 819 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 FBXO21O94952 628 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 AMPD1P23109 780 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 YWHAHQ04917 246 aaPredicted RBP16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 EFTUD2Q15029 972 aaKnown RBP eCLIP16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 KLHL38Q2WGJ6 581 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 PLEKHG4Q58EX7 1191 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 FAXCQ5TGI0 409 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 NCBP2-AS2Q69YL0 99 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 KCNT2Q6UVM3 1135 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 PIGWQ7Z7B1 504 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 IGDCC3Q8IVU1 814 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 GDAP1Q8TB36 358 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 CKAP2Q8WWK9 683 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 TRABDQ9H4I3 376 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 CNGB3Q9NQW8 809 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 ETNK2Q9NVF9 386 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 TMEM161AQ9NX61 479 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 DTLQ9NZJ0 730 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 SENP1Q9P0U3 644 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 TEX264Q9Y6I9 313 aa16.65■□□□□ 0.26
AP000253.1-201ENST00000449339 PIAS1O75925 651 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 APRTP07741 180 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 CCL5P13501 91 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 TSHRP16473 764 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 TYMPP19971 482 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 STX2P32856 288 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 NETO2Q8NC67 525 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 SCAMP5Q8TAC9 235 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 FAM193BQ96PV7 902 aaPredicted RBP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 KIF9Q9HAQ2 790 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 RCOR3Q9P2K3 495 aaPredicted RBP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 VWA8A3KMH1 1905 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 TCP11X1B4DZS4 312 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 LTFP02788 710 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 AMHP03971 560 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 NCAM1P13591 858 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 TSPY1Q01534 308 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 DEUP1Q05D60 604 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 IFRD2Q12894 506 aaPredicted RBP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 RNF187Q5TA31 235 aaPredicted RBP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 SGSM3Q96HU1 749 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 QKIQ96PU8 341 aaKnown RBP eCLIP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 SMC6Q96SB8 1091 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 PAFAH2Q99487 392 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 NSRP1Q9H0G5 558 aaKnown RBP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 ETNK1Q9HBU6 452 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 DMAP1Q9NPF5 467 aaPredicted RBP16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 ANLNQ9NQW6 1124 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 SAMD15Q9P1V8 674 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 PCDHB7Q9Y5E2 793 aa16.64■□□□□ 0.25
AP000253.1-201ENST00000449339 SPAG7O75391 227 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 GCATO75600 419 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 MAGEA6P43360 314 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 MAGEA9P43362 315 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 CCL23P55773 120 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 C4orf22Q6V702 233 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 C4orf33Q8N1A6 199 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 CCDC197Q8NCU1 140 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 STKLD1Q8NE28 680 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 RNF139Q8WU17 664 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 B3GALT6Q96L58 329 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 DHRS4Q9BTZ2 278 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 ARHGEF4Q9NR80 690 aa16.63■□□□□ 0.25
AP000253.1-201ENST00000449339 PRPF4O43172 522 aaKnown RBP eCLIP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 SLC39A12Q504Y0 691 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 HEATR6Q6AI08 1181 aaKnown RBP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 ADGRD1Q6QNK2 874 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 VPS52Q8N1B4 723 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 AGGF1Q8N302 714 aaeCLIP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 ANKS4BQ8N8V4 417 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 CASD1Q96PB1 797 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 OLFM3Q96PB7 478 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 CYTH2Q99418 400 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 ELAC2Q9BQ52 826 aaKnown RBP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 PPP1R12CQ9BZL4 782 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 KANSL3Q9P2N6 904 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 OGDHLQ9ULD0 1010 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 TCRBV9S1A1TA0A576 114 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 I6L893 689 aaPredicted RBP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 TADA2AO75478 443 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 METTL18O95568 372 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms