RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 TMEM8BA6NDV4 472 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 PATE3B3GLJ2 98 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 PRRT4C9JH25 899 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 FBXO21O94952 628 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 KLKB1P03952 638 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 ATP5BP06576 529 aaKnown RBP7.39□□□□□ -1.23
VPS41-208ENST00000448833 HMBSP08397 361 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 NDUFV2P19404 249 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 ITPKAP23677 461 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CD6P30203 668 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 WASP42768 502 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 PTGER3P43115 390 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 FMO5P49326 533 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 MFAP3P55082 362 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 RING1Q06587 406 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 ZNF252P-AS1Q0IIN9 211 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 ENPP2Q13822 863 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 TRIP4Q15650 581 aaPredicted RBP7.39□□□□□ -1.23
VPS41-208ENST00000448833 CNGA2Q16280 664 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 GOLGA7BQ2TAP0 167 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 PLEKHG6Q3KR16 790 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CCDC40Q4G0X9 1142 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CBWD6Q4V339 395 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CBWD3Q5JTY5 395 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CBWD5Q5RIA9 395 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 FYB2Q5VWT5 728 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 BSPRYQ5W0U4 402 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 IL27RAQ6UWB1 636 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 LCLAT1Q6UWP7 414 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 KIAA1324Q6UXG2 1013 aaKnown RBP7.39□□□□□ -1.23
VPS41-208ENST00000448833 SERPINA13PQ6UXR4 307 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 TOGARAM2Q6ZUX3 1019 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 SFTPA1Q8IWL2 248 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 FAM217AQ8IXS0 508 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 SMYD4Q8IYR2 804 aaPredicted RBP7.39□□□□□ -1.23
VPS41-208ENST00000448833 TRIML1Q8N9V2 468 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 BHMTQ93088 406 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 WBP2Q969T9 261 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 SLC35C1Q96A29 364 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 AZIN2Q96A70 460 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 TMA16Q96EY4 203 aaKnown RBP7.39□□□□□ -1.23
VPS41-208ENST00000448833 SIPA1Q96FS4 1042 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 EEF2KMTQ96G04 330 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 PIWIL1Q96J94 861 aaKnown RBP7.39□□□□□ -1.23
VPS41-208ENST00000448833 MRGPRX1Q96LB2 322 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 HSFY1Q96LI6 401 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 TMEM121BQ9BXQ6 578 aaPredicted RBP7.39□□□□□ -1.23
VPS41-208ENST00000448833 ULBP1Q9BZM6 244 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 TMEM74BQ9NUR3 256 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CACNA2D2Q9NY47 1150 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 PLK2Q9NYY3 685 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 SUN2Q9UH99 717 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 STOML2Q9UJZ1 356 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 TSPAN16Q9UKR8 245 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CACNA1BQ00975 2339 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 CACNA1EQ15878 2313 aa7.39□□□□□ -1.23
VPS41-208ENST00000448833 KMT2BQ9UMN6 2715 aaPredicted RBP7.38□□□□□ -1.23
VPS41-208ENST00000448833 A0A1B0GTW7 788 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 MEI4A8MW99 385 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 MDM4O15151 490 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 TRIM24O15164 1050 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 MED7O43513 233 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 IGLV3-19P01714 112 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 PROS1P07225 676 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ACADSBP45954 432 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 MAPK8P45983 427 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 SNX16P57768 344 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 GCNT1Q02742 428 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ZBTB16Q05516 673 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ADIGQ0VDE8 80 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 SEMA3BQ13214 749 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 MTA1Q13330 715 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 MEA1Q16626 185 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 FUT11Q495W5 492 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 KIAA1211LQ6NV74 962 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 TMEM270Q6UE05 265 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ARMCX6Q7L4S7 300 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ENOSF1Q7L5Y1 443 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 TMPRSS6Q8IU80 811 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 PPM1KQ8N3J5 372 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 FRMD1Q8N878 549 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ENGASEQ8NFI3 743 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 SLC35F5Q8WV83 523 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 DNASE2BQ8WZ79 361 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 HSPA12BQ96MM6 686 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 PPP1R9BQ96SB3 815 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ACOX2Q99424 681 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ARID3AQ99856 593 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 GTPBP2Q9BX10 602 aaKnown RBP7.38□□□□□ -1.23
VPS41-208ENST00000448833 CIPCQ9C0C6 399 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 CAPN10Q9HC96 672 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 GDPD2Q9HCC8 539 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 CD248Q9HCU0 757 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 ZDHHC4Q9NPG8 344 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 DNAAF2Q9NVR5 837 aaKnown RBP7.38□□□□□ -1.23
VPS41-208ENST00000448833 TMEM51Q9NW97 253 aa7.38□□□□□ -1.23
VPS41-208ENST00000448833 USP36Q9P275 1121 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms