RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 HCFC1R1Q9NWW0 138 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 ARHGEF38Q9NXL2 777 aa25.78■■□□□ 1.72
RFFL-206ENST00000447669 CLASP2O75122 1294 aaKnown RBP25.77■■□□□ 1.72
RFFL-206ENST00000447669 LRG1P02750 347 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 CHRNA3P32297 505 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 TBX4P57082 545 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 ARL13BQ3SXY8 428 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.77■■□□□ 1.72
RFFL-206ENST00000447669 MAIP1Q8WWC4 291 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 FAF2Q96CS3 445 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 CEP295NLQ96MC4 621 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 CYP2S1Q96SQ9 504 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 OR12D3Q9UGF7 316 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 HEY1Q9Y5J3 304 aa25.77■■□□□ 1.72
RFFL-206ENST00000447669 COCHO43405 550 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 PAGE1O75459 146 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 SRGAP2BP0DMP2 458 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 GJA1P17302 382 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 CCR1P32246 355 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 SCAPQ12770 1279 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 ZNF697Q5TEC3 545 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 DDX42Q86XP3 938 aaKnown RBP eCLIP25.76■■□□□ 1.72
RFFL-206ENST00000447669 TRMT2BQ96GJ1 504 aaKnown RBP25.76■■□□□ 1.72
RFFL-206ENST00000447669 SLC39A13Q96H72 371 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 SLITRK6Q9H5Y7 841 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 IL21Q9HBE4 155 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 EPB41L5Q9HCM4 733 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 MAN1C1Q9NR34 630 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 TRPM5Q9NZQ8 1165 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 TLR6Q9Y2C9 796 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 EFR3BQ9Y2G0 817 aa25.76■■□□□ 1.72
RFFL-206ENST00000447669 LIASO43766 372 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 LPXNO60711 386 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 KCNQ1P51787 676 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 TRIP13Q15645 432 aaPredicted RBP25.76■■□□□ 1.71
RFFL-206ENST00000447669 CCNG2Q16589 344 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 CCDC114Q96M63 670 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 SLC22A12Q96S37 553 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 STIM2Q9P246 746 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 OBSL1O75147 1896 aa25.76■■□□□ 1.71
RFFL-206ENST00000447669 KCNU1A8MYU2 1149 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 EEF2KO00418 725 aaKnown RBP25.75■■□□□ 1.71
RFFL-206ENST00000447669 MYBL2P10244 700 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 ARL4AP40617 200 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 SLC10A2Q12908 348 aaPredicted RBP25.75■■□□□ 1.71
RFFL-206ENST00000447669 SEMA3BQ13214 749 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 GAREM2Q75VX8 874 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 ARHGEF4Q9NR80 690 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 PCYOX1Q9UHG3 505 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 MSRAQ9UJ68 235 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 DYNC1I1O14576 645 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 APOL1O14791 398 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 F11P03951 625 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 CYP4F8P98187 520 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 GBE1Q04446 702 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 HECTD3Q5T447 861 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 TXNDC8Q6A555 127 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 SLC9A4Q6AI14 798 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 CCDC149Q6ZUS6 474 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 ZC3H18Q86VM9 953 aaKnown RBP25.75■■□□□ 1.71
RFFL-206ENST00000447669 JAMLQ86YT9 394 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 PSTKQ8IV42 348 aaKnown RBP25.75■■□□□ 1.71
RFFL-206ENST00000447669 TP53INP2Q8IXH6 220 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 CCDC26Q8TAB7 109 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 TMEM121Q9BTD3 319 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 NACA2Q9H009 215 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 TRPC7Q9HCX4 862 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 GKN1Q9NS71 199 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 MAFFQ9ULX9 164 aa25.75■■□□□ 1.71
RFFL-206ENST00000447669 NUP205Q92621 2012 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 XIRP2A4UGR9 3374 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 LRIG2O94898 1065 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 ATP5C1P36542 298 aaKnown RBP25.74■■□□□ 1.71
RFFL-206ENST00000447669 NRLP54845 237 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 TUBB4BP68371 445 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 GLE1Q53GS7 698 aaKnown RBP25.74■■□□□ 1.71
RFFL-206ENST00000447669 SNX30Q5VWJ9 437 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 CCDC70Q6NSX1 233 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 FBXO38Q6PIJ6 1188 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 RFX8Q6ZV50 586 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 C14orf80Q86SX3 495 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 GLIS1Q8NBF1 620 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 PDZD8Q8NEN9 1154 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 CORO1BQ9BR76 489 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 LRRC3Q9BY71 257 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 DPH5Q9H2P9 285 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 SLC28A3Q9HAS3 691 aa25.74■■□□□ 1.71
RFFL-206ENST00000447669 OLA1Q9NTK5 396 aaKnown RBP25.74■■□□□ 1.71
RFFL-206ENST00000447669 EYSQ5T1H1 3165 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 APOC4-APOC2K7ER74 178 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 APOC2P02655 101 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 GABRR2P28476 465 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 BYSLQ13895 437 aaKnown RBP25.73■■□□□ 1.71
RFFL-206ENST00000447669 BRMS1LQ5PSV4 323 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 PPM1LQ5SGD2 360 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 PIK3R6Q5UE93 754 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 NCBP2-AS2Q69YL0 99 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 TMC8Q8IU68 726 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 CASKIN2Q8WXE0 1202 aa25.73■■□□□ 1.71
RFFL-206ENST00000447669 OVCA2Q8WZ82 227 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms