RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 RIPK2O43353 540 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TLR2O60603 784 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RFPL2O75678 378 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SEC24AO95486 1093 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 UMPSP11172 480 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 GJA1P17302 382 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 AOC1P19801 751 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TAC1P20366 129 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PROZP22891 400 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CAPGP40121 348 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PPP5CP53041 499 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PUDPQ08623 228 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SLC39A6Q13433 755 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 NFYCQ13952 458 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TOB2Q14106 344 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 KCNJ8Q15842 424 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 FAM47AQ5JRC9 791 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 COLEC12Q5KU26 742 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PIK3R6Q5UE93 754 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RIPOR1Q6ZS17 1223 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CCDC185Q8N715 623 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 EMC1Q8N766 993 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 UHMK1Q8TAS1 419 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 SLC22A8Q8TCC7 542 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ADAMTS16Q8TE57 1224 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SLC9A6Q92581 669 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CHP1Q99653 195 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 KIAA1586Q9HCI6 787 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ATP13A2Q9NQ11 1180 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 UQCRFS1P1P0C7P4 283 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 NAT2P11245 290 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 GZMAP12544 262 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 UBXN2AP68543 259 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DPYDQ12882 1025 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 UGP2Q16851 508 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 KLHDC7AQ5VTJ3 777 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TIGD3Q6B0B8 471 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TMEM214Q6NUQ4 689 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 ENOSF1Q7L5Y1 443 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 NLRP10Q86W26 655 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CCDC60Q8IWA6 550 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 SLC7A5P1Q8MH63 180 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 FBXO30Q8TB52 745 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 AP3S1Q92572 193 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DPF2Q92785 391 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PTCD3Q96EY7 689 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 MS4A14Q96JA4 679 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RANBP9Q96S59 729 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 AP1M1Q9BXS5 423 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 BOLA2Q9H3K6 86 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CYB5R1Q9UHQ9 305 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MAGED1Q9Y5V3 778 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 H0YGN5 161 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 FCHO1O14526 889 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SHOXO15266 292 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 GMDSO60547 372 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MYL3P08590 195 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RPA1P27694 616 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 HOXD11P31277 338 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 CD81P60033 236 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 BNIP2Q12982 314 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TARDBPQ13148 414 aaKnown RBP eCLIP2.99□□□□□ -1.933e-8■■■■■ 36.6
CHD9-203ENST00000447540 LRP8Q14114 963 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DUSP7Q16829 419 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DUPD1Q68J44 220 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SLC9A4Q6AI14 798 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PGM2L1Q6PCE3 622 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 NAPRTQ6XQN6 538 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 EIF3MQ7L2H7 374 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 SH3BP5LQ7L8J4 393 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 LHFPL3Q86UP9 236 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ANKLE2Q86XL3 938 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 USHBP1Q8N6Y0 703 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 FANK1Q8TC84 345 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DNAJA4Q8WW22 397 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 ZSWIM3Q96MP5 696 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ZNF560Q96MR9 790 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 POLR3BQ9NW08 1133 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.99□□□□□ -1.932e-6■■□□□ 11.7
CHD9-203ENST00000447540 NFS1Q9Y697 457 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 E9PAM4 449 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SCO2O43819 266 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RASGRP1O95267 797 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MYBP10242 640 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RXRGP48443 463 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ATXN3P54252 364 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 PPP2R2BQ00005 443 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MPP1Q00013 466 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 COTL1Q14019 142 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TGFBIQ15582 683 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 HYIQ5T013 277 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 VWA5B1Q5TIE3 1220 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SPOPLQ6IQ16 392 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RRM2BQ7LG56 351 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 ERO1BQ86YB8 467 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MPP5Q8N3R9 675 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CNTD1Q8N815 330 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RP9Q8TA86 221 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 PRCCQ92733 491 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms