RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PDCP20941 246 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 ITPKBP27987 946 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
HMGN1-208ENST00000443046 NASPP49321 788 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-208ENST00000443046 PDE4CQ08493 712 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 KNOP1Q1ED39 458 aaKnown RBP15.1■□□□□ 0.01
HMGN1-208ENST00000443046 SERPINA13PQ6UXR4 307 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 UNC13DQ70J99 1090 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 PIP4K2CQ8TBX8 421 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 CYFIP2Q96F07 1278 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 CDK5RAP1Q96SZ6 601 aaKnown RBP15.1■□□□□ 0.01
HMGN1-208ENST00000443046 LHX5Q9H2C1 402 aa15.1■□□□□ 0.01
HMGN1-208ENST00000443046 TP53BP1Q12888 1972 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-208ENST00000443046 PLK4O00444 970 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 TLX3O43711 291 aaPredicted RBP15.09■□□□□ 0.01
HMGN1-208ENST00000443046 STX6O43752 255 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 DFNA5O60443 496 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 RALAP11233 206 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 SYT1P21579 422 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 CD27P26842 260 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 DLG4P78352 724 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 ZBTB16Q05516 673 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 LAYNQ6UX15 382 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 KIAA0907Q7Z7F0 614 aaPredicted RBP15.09■□□□□ 0.01
HMGN1-208ENST00000443046 CACUL1Q86Y37 369 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 ENGASEQ8NFI3 743 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 SNX19Q92543 992 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 DCBLD2Q96PD2 775 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 CIPCQ9C0C6 399 aa15.09■□□□□ 0.01
HMGN1-208ENST00000443046 MYLKQ15746 1914 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 A0A1B0GTQ1 180 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 C10orf142B7Z368 130 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 SEMA4FO95754 770 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 CYBBP04839 570 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 EFEMP1Q12805 493 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 C1orf220Q5T0J3 134 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 SPOPLQ6IQ16 392 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 SV2AQ7L0J3 742 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 DENND1CQ8IV53 801 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 SLC9A9Q8IVB4 645 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 IQUBQ8NA54 791 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 LINC00301Q8NCQ3 95 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 JAKMIP2Q96AA8 810 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 NXPE2Q96DL1 559 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 DUSP16Q9BY84 665 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 BTBD1Q9H0C5 482 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 FBRSQ9HAH7 460 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 SLC39A2Q9NP94 309 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 FTSJ1Q9UET6 329 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 RAI2Q9Y5P3 530 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 ARID1BQ8NFD5 2236 aaPredicted RBP15.08■□□□□ 0
HMGN1-208ENST00000443046 PLXNA2O75051 1894 aa15.08■□□□□ 0
HMGN1-208ENST00000443046 NAV2Q8IVL1 2488 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 PVALEFA0A1B0GWK0 134 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 IKBKBO14920 756 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 VILLO15195 856 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 IGHV4-34P06331 123 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 HMBSP08397 361 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 C1SP09871 688 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 CDK4P11802 303 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 PLA2G2AP14555 144 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 HOXD9P28356 352 aaPredicted RBP15.07■□□□□ 0
HMGN1-208ENST00000443046 HLA-FP30511 346 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 RPS14P62263 151 aaKnown RBP15.07■□□□□ 0
HMGN1-208ENST00000443046 RTP5Q14D33 572 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 ADIPOR2Q86V24 386 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 ZC3H3Q8IXZ2 948 aaKnown RBP15.07■□□□□ 0
HMGN1-208ENST00000443046 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.07■□□□□ 0
HMGN1-208ENST00000443046 GOLGA5Q8TBA6 731 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 DDI1Q8WTU0 396 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 DHX58Q96C10 678 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 NT5C1AQ9BXI3 368 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 BACH2Q9BYV9 841 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 UBXN6Q9BZV1 441 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 SGK2Q9HBY8 427 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 PRSS16Q9NQE7 514 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 RASAL2Q9UJF2 1139 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 STOML2Q9UJZ1 356 aa15.07■□□□□ 0
HMGN1-208ENST00000443046 CASP1P29466 404 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 BCAT1P54687 386 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 RACK1P63244 317 aaKnown RBP15.06■□□□□ 0
HMGN1-208ENST00000443046 IL9RQ01113 521 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 SHBQ15464 509 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 TRIP4Q15650 581 aaPredicted RBP15.06■□□□□ 0
HMGN1-208ENST00000443046 INAVAQ3KP66 663 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 CCDC157Q569K6 752 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 RAB41Q5JT25 222 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 PPP1R26Q5T8A7 1209 aaPredicted RBP15.06■□□□□ 0
HMGN1-208ENST00000443046 ZNF843Q8N446 348 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 TMC2Q8TDI7 906 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 TSC1Q92574 1164 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 NRSN2Q9GZP1 204 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 MAGEF1Q9HAY2 307 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 CYP3A43Q9HB55 503 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 APOBEC3GQ9HC16 384 aaKnown RBP15.06■□□□□ 0
HMGN1-208ENST00000443046 MARCH2Q9P0N8 246 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 MTMR6Q9Y217 621 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 MYO18BQ8IUG5 2567 aa15.06■□□□□ 0
HMGN1-208ENST00000443046 ENC1O14682 589 aa15.05■□□□□ -0
HMGN1-208ENST00000443046 PPP6R2O75170 966 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms