RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PACSIN1Q9BY11 444 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 FOXQ1Q9C009 403 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 FBRSL1Q9HCM7 1045 aaKnown RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 TMPRSS4Q9NRS4 437 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 RRN3Q9NYV6 651 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 MYO1AQ9UBC5 1043 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 CNOT8Q9UFF9 292 aaKnown RBP16.66■□□□□ 0.26
USP39-205ENST00000442708 STOML2Q9UJZ1 356 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 ZNF510Q9Y2H8 683 aa16.66■□□□□ 0.26
USP39-205ENST00000442708 GOLGA6L3A6NEY3 463 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 ACSL4O60488 711 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 ENDOD1O94919 500 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 MOCS2O96007 188 aaPredicted RBP16.65■□□□□ 0.26
USP39-205ENST00000442708 ADH5P11766 374 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 OPRD1P41143 372 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 SLC6A11P48066 632 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 CXCR3P49682 368 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 SGSHP51688 502 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 GALCP54803 685 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 ATP11AP98196 1134 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 DEUP1Q05D60 604 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 ZNF252P-AS1Q0IIN9 211 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 NUGGCQ68CJ6 796 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 RFWD3Q6PCD5 774 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.65■□□□□ 0.26
USP39-205ENST00000442708 RALGPS2Q86X27 583 aaPredicted RBP16.65■□□□□ 0.26
USP39-205ENST00000442708 UNC45BQ8IWX7 931 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 FAM3CQ92520 227 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 CCDC42Q96M95 316 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 C8orf33Q9H7E9 229 aaPredicted RBP16.65■□□□□ 0.26
USP39-205ENST00000442708 STAP1Q9ULZ2 295 aa16.65■□□□□ 0.26
USP39-205ENST00000442708 TMEM191CA6NGB0 347 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 HOXC11O43248 304 aaPredicted RBP16.64■□□□□ 0.25
USP39-205ENST00000442708 CCP110O43303 1012 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 PI15O43692 258 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 AKR1B10O60218 316 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 TSPAN3O60637 253 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 LATS1O95835 1130 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 ADH1CP00326 375 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 GPD1P21695 349 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 TARSP26639 723 aaKnown RBP16.64■□□□□ 0.25
USP39-205ENST00000442708 GBP1P32455 592 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 PTPN9P43378 593 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 FZD5Q13467 585 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 PON2Q15165 354 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 CDO1Q16878 200 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 ADGRF1Q5T601 910 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 CPXM2Q8N436 756 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 FLCNQ8NFG4 579 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 CENPIQ92674 756 aaPredicted RBP16.64■□□□□ 0.25
USP39-205ENST00000442708 BHMTQ93088 406 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 AZIN2Q96A70 460 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 PBXIP1Q96AQ6 731 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 DEF6Q9H4E7 631 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 LTB4R2Q9NPC1 389 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 PARVAQ9NVD7 372 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.64■□□□□ 0.25
USP39-205ENST00000442708 PLK2Q9NYY3 685 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 MARK1Q9P0L2 795 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 IMPACTQ9P2X3 320 aa16.64■□□□□ 0.25
USP39-205ENST00000442708 KMT2EQ8IZD2 1858 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 KANSL1LA0AUZ9 987 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 ANTXRLA6NF34 631 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 NEDD8-MDP1E9PL57 170 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 TRIM24O15164 1050 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 GPR37L1O60883 481 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 APOEP02649 317 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 CYP1A2P05177 515 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 MYBL1P10243 752 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 SDC4P31431 198 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 CCR1P32246 355 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 SLC11A2P49281 568 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 GALK1P51570 392 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 ZNF143P52747 638 aaPredicted RBP16.63■□□□□ 0.25
USP39-205ENST00000442708 HDAC4P56524 1084 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 NR1H3Q13133 447 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 PPP2R5DQ14738 602 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 ANO4Q32M45 955 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 ARTNQ5T4W7 220 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 PIK3R6Q5UE93 754 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 FYB2Q5VWT5 728 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 ZNF852Q6ZMS4 543 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 BMP8AQ7Z5Y6 402 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 SFTPA1Q8IWL2 248 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 ETFBKMTQ8IXQ9 262 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 NAT16Q8N8M0 369 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 EZH1Q92800 747 aaPredicted RBP16.63■□□□□ 0.25
USP39-205ENST00000442708 RNF34Q969K3 372 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 SHDQ96IW2 340 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 PRICKLE1Q96MT3 831 aaPredicted RBP16.63■□□□□ 0.25
USP39-205ENST00000442708 PRMT1Q99873 361 aaKnown RBP16.63■□□□□ 0.25
USP39-205ENST00000442708 BBS2Q9BXC9 721 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 MFSD1Q9H3U5 465 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 ARHGEF38Q9NXL2 777 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 CLEC4EQ9ULY5 219 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 NDRG2Q9UN36 371 aaKnown RBP16.63■□□□□ 0.25
USP39-205ENST00000442708 SNX10Q9Y5X0 201 aa16.63■□□□□ 0.25
USP39-205ENST00000442708 SOWAHDA6NJG2 315 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms