RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HTRA2O43464 458 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 PRSS23O95084 383 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 NXPH3O95157 252 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 TPM2P07951 284 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 IFNAR1P17181 557 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 NPTX2P47972 431 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF75DP51815 510 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 RCAN1P53805 252 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 FAM193AP78312 1265 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 SATB1Q01826 763 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 POU5F1BQ06416 359 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 SEMA5AQ13591 1074 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 WTAPQ15007 396 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 SLC39A14Q15043 492 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 PPP2R5BQ15173 497 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 LLGL1Q15334 1064 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 STX1AQ16623 288 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 LONRF1Q17RB8 773 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 TBC1D9BQ66K14 1250 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 KIAA0895LQ68EN5 471 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 SUMO4Q6EEV6 95 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 APOA5Q6Q788 366 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 LUZP1Q86V48 1076 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 NBPF5PQ86XG9 351 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 FAM186BQ8IYM0 893 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ADGRG5Q8IZF4 528 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 CFAP52Q8N1V2 620 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 MIGA1Q8NAN2 632 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 FAM98AQ8NCA5 519 aaKnown RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 MYRIPQ8NFW9 859 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 TDRD7Q8NHU6 1098 aaKnown RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 MRPS27Q92552 414 aaKnown RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ESR2Q92731 530 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 CELF1Q92879 486 aaKnown RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 PHKBQ93100 1093 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 SARAFQ96BY9 339 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 FAM84BQ96KN1 310 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 KLHL32Q96NJ5 620 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 TRIB1Q96RU8 372 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 SDF4Q9BRK5 362 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 B3GNT5Q9BYG0 378 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 FTOQ9C0B1 505 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 NAT10Q9H0A0 1025 aaKnown RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 BHMT2Q9H2M3 363 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 GOLPH3LQ9H4A5 285 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 WDCPQ9H6R7 721 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 LY9Q9HBG7 655 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ANO10Q9NW15 660 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 FEZ2Q9UHY8 353 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ANAPC4Q9UJX5 808 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCNL1Q9UK58 526 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 IPPQ9Y573 584 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 PCDHA13Q9Y5I0 950 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF804BA4D1E1 1349 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 NEDD4P46934 1319 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 STK36Q9NRP7 1315 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 LRP5O75197 1615 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 PHLPP1O60346 1717 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 NRAPQ86VF7 1730 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 DOT1LQ8TEK3 1739 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 ANKRD36CQ5JPF3 1778 aa3.83□□□□□ -1.8
HMGB3P11-201ENST00000440127 WNK3Q9BYP7 1800 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 RREB1Q92766 1687 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 CICQ96RK0 1608 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 BCL9LQ86UU0 1499 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 NID2Q14112 1375 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PDS5AQ29RF7 1337 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 A0A0B4J269 797 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 A0A1B0GVL5 298 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 BECN2A8MW95 431 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 WNT10BO00744 389 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 TBX3O15119 743 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PIP5K1CO60331 668 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PPP6R2O75170 966 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 UBXN7O94888 489 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 DEXIO95424 95 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 TTLL1O95922 423 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 SLC3A2P08195 630 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 SETSIPP0DME0 302 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PCP11498 1178 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF37AP17032 561 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 RXRAP19793 462 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 ITGALP20701 1170 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 CMA1P23946 247 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 EDNRBP24530 442 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 U2AF2P26368 475 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 AGFG1P52594 562 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 DYNLL1P63167 89 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 TUBB3Q13509 450 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 IQCB1Q15051 598 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZRSR1Q15695 479 aaKnown RBP3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC93Q567U6 631 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 SWSAP1Q6NVH7 229 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC149Q6ZUS6 474 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 ADGRA1Q86SQ6 560 aa3.82□□□□□ -1.8
HMGB3P11-201ENST00000440127 PEG10Q86TG7 708 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms