RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 STOML2Q9UJZ1 356 aa19.6■□□□□ 0.73
CCDC78-204ENST00000439619 CYP8B1Q9UNU6 501 aa19.6■□□□□ 0.73
CCDC78-204ENST00000439619 PLA2G4CQ9UP65 541 aa19.6■□□□□ 0.73
CCDC78-204ENST00000439619 CNTN6Q9UQ52 1028 aa19.6■□□□□ 0.73
CCDC78-204ENST00000439619 C4orf47A7E2U8 309 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 CAPN9O14815 690 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 MSI1O43347 362 aaKnown RBP19.59■□□□□ 0.73
CCDC78-204ENST00000439619 LETM1O95202 739 aaPredicted RBP19.59■□□□□ 0.73
CCDC78-204ENST00000439619 ATXN3P54252 364 aaPredicted RBP19.59■□□□□ 0.73
CCDC78-204ENST00000439619 TBX4P57082 545 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 RING1Q06587 406 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 SYCP2LQ5T4T6 812 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 SERPINA13PQ6UXR4 307 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 GBP6Q6ZN66 633 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 FAM114A1Q8IWE2 563 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 FRMD1Q8N878 549 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 STK32AQ8WU08 396 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 KREMEN1Q96MU8 473 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 ZSWIM1Q9BR11 485 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 LSM14BQ9BX40 385 aaKnown RBP19.59■□□□□ 0.73
CCDC78-204ENST00000439619 PRDM16Q9HAZ2 1276 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 DACH1Q9UI36 760 aa19.59■□□□□ 0.73
CCDC78-204ENST00000439619 DNAH14Q0VDD8 3507 aa19.58■□□□□ 0.73
CCDC78-204ENST00000439619 IGHV1OR15-9A0A0B4J2B8 117 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 WASH3PC4AMC7 463 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 THAP12O43422 761 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 CFIP05156 583 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 ACADMP11310 421 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 GNA15P30679 374 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 USP8P40818 1118 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 GPD2P43304 727 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 MTIF2P46199 727 aaKnown RBP19.58■□□□□ 0.72
CCDC78-204ENST00000439619 IRX4P78413 519 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 ZNF33AQ06730 810 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 EXOC3L4Q17RC7 722 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 DUOXA1Q1HG43 343 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 MPP7Q5T2T1 576 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 SMYD5Q6GMV2 418 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 TRIM65Q6PJ69 517 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 METTL3Q86U44 580 aaKnown RBP19.58■□□□□ 0.72
CCDC78-204ENST00000439619 SCUBE3Q8IX30 993 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 PRCCQ92733 491 aaPredicted RBP19.58■□□□□ 0.72
CCDC78-204ENST00000439619 FOXJ1Q92949 421 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 AZIN2Q96A70 460 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 ERLEC1Q96DZ1 483 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 MED15Q96RN5 788 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 CRACR2AQ9BSW2 395 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 APEX2Q9UBZ4 518 aa19.58■□□□□ 0.72
CCDC78-204ENST00000439619 PATE3B3GLJ2 98 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 TM4SF5O14894 197 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 ATP5BP06576 529 aaKnown RBP19.57■□□□□ 0.72
CCDC78-204ENST00000439619 HOXD9P28356 352 aaPredicted RBP19.57■□□□□ 0.72
CCDC78-204ENST00000439619 IL12RB1P42701 662 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 GFPT1Q06210 699 aaPredicted RBP19.57■□□□□ 0.72
CCDC78-204ENST00000439619 ZNF234Q14588 700 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 FUT11Q495W5 492 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 SLC23A3Q6PIS1 610 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 AHI1Q8N157 1196 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 ZNF606Q8WXB4 792 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 CD248Q9HCU0 757 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 PILRBQ9UKJ0 227 aa19.57■□□□□ 0.72
CCDC78-204ENST00000439619 GTPBP10A4D1E9 387 aaKnown RBP19.56■□□□□ 0.72
CCDC78-204ENST00000439619 ACSL4O60488 711 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 IGLV3-27P01718 113 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 EPHX1P07099 455 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 PRKCSHP14314 528 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-204ENST00000439619 GNSP15586 552 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 ITPKAP23677 461 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 CD6P30203 668 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 OXTRP30559 389 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 SNX16P57768 344 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 NNTQ13423 1086 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 ENPP2Q13822 863 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 ARHGAP44Q17R89 818 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 FNDC3BQ53EP0 1204 aaKnown RBP19.56■□□□□ 0.72
CCDC78-204ENST00000439619 WDR45BQ5MNZ6 344 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 BEND5Q7L4P6 421 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 RGL4Q8IZJ4 473 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 DEFB119Q8N690 84 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 HJURPQ8NCD3 748 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-204ENST00000439619 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 SIPA1Q96FS4 1042 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 P2RY11Q96G91 374 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 NOX5Q96PH1 765 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 ABCB8Q9NUT2 735 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 SUSD2Q9UGT4 822 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 GGA2Q9UJY4 613 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 CLEC4EQ9ULY5 219 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 SLC6A14Q9UN76 642 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 TLR6Q9Y2C9 796 aa19.56■□□□□ 0.72
CCDC78-204ENST00000439619 ATXN2Q99700 1313 aaKnown RBP19.55■□□□□ 0.72
CCDC78-204ENST00000439619 TBL1XO60907 577 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 GABBR2O75899 941 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 KCNK5O95279 499 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 CALCAP01258 141 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 APOEP02649 317 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 PABPC1P11940 636 aaKnown RBP19.55■□□□□ 0.72
CCDC78-204ENST00000439619 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
CCDC78-204ENST00000439619 RPL34P49207 117 aaKnown RBP19.55■□□□□ 0.72
CCDC78-204ENST00000439619 UAP1L1Q3KQV9 507 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms